RNA id: TU2677981



Basic Information


Item Value
RNA id TU2677981
length 244
lncRNA type read_through
GC content 0.50
exon number 2
gene id G2339168
representative True

Chromosome Information


Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1137394 ~ 1138351 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTCCTGGCTACTGTACCTGTCATAGTGAGGTGTCCTGGCTACTGTACCTGTCATAGTGAGGTGTCCTGGTTACTGTACCTGTCACAGTGAGGTGTCCTGGTTACTGTACCTGTCATAGTGAGGTGTCCTGGCTACTTTACCTGTCATAGTGAGGTGTCCTAGCTACTTTACCTGTCATAGTGAGGTGTCCTGGCTACTTTACCTGTCATAGTGAGGTGTCCTGGCTACTGTACCTGTCATAGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2677980 lncRNA downstream 351 1136395 ~ 1137043 (-) True G2339167
TU2677962 lncRNA downstream 2640 1134422 ~ 1134754 (-) True G2339155
TU2677971 lncRNA downstream 16272 1111179 ~ 1121122 (-) True G2339158
TU2677970 lncRNA downstream 32065 1097497 ~ 1105329 (-) True G2339157
TU2677961 lncRNA downstream 46801 1090302 ~ 1090593 (-) True G2339154
TU2677988 lncRNA upstream 7166 1145517 ~ 1149117 (-) False G2339172
TU2677986 lncRNA upstream 8292 1146643 ~ 1149117 (-) False G2339172
TU2677987 lncRNA upstream 8292 1146643 ~ 1149117 (-) True G2339172
TU2677999 lncRNA upstream 12462 1150813 ~ 1152399 (-) False G2339176
TU2678000 lncRNA upstream 12462 1150813 ~ 1152478 (-) False G2339176
XR_005041780.1 mRNA downstream 52611 1083972 ~ 1084783 (-) False LOC118947123
XM_036972326.1 mRNA downstream 89215 1026745 ~ 1048179 (-) False LOC110518374
XM_036972330.1 mRNA downstream 134210 973741 ~ 1003184 (-) False LOC110513313
XM_036972322.1 mRNA downstream 178915 860243 ~ 958479 (-) True LOC110516334
XR_005041776.1 mRNA downstream 178916 858325 ~ 958478 (-) False LOC110516334
XM_036972337.1 mRNA upstream 19701 1158052 ~ 1183417 (-) False LOC110516784
XM_036972302.1 mRNA upstream 188317 1326668 ~ 1417233 (-) False LOC110516509
XM_036972300.1 mRNA upstream 188317 1326668 ~ 1417782 (-) False LOC110516509
XM_036972301.1 mRNA upstream 190547 1328898 ~ 1417783 (-) False LOC110516509
XM_036972341.1 mRNA upstream 298148 1436499 ~ 1488403 (-) False LOC118947127
TU2677965 other downstream 14755 1107732 ~ 1122639 (-) True G2339156
TU2677915 other downstream 108176 1026999 ~ 1029218 (-) True LOC110518374
TU2677806 other downstream 134487 1001019 ~ 1002907 (-) True LOC110513313
TU2677900 other downstream 137537 997931 ~ 999857 (-) False G2339121
TU2677813 other downstream 168240 963149 ~ 969154 (-) True G2339060
TU2677994 other upstream 20196 1158547 ~ 1159571 (-) False LOC110516784
TU2678050 other upstream 96853 1235204 ~ 1235588 (-) True G2339202
TU2678053 other upstream 103723 1242074 ~ 1243382 (-) False G2339205
TU2678054 other upstream 103723 1242074 ~ 1243213 (-) True G2339205
TU2678190 other upstream 306610 1444961 ~ 1454271 (-) False LOC118947127

Expression Profile