RNA id: TU2678130



Basic Information


Item Value
RNA id TU2678130
length 368
lncRNA type intronic
GC content 0.39
exon number 3
gene id G2339253
representative True

Chromosome Information


Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1403902 ~ 1406656 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GATAATAGTAGTGGTGAAATGGGATCAGGGCTGAGTAAGGCATcaatgataatagtagtagtgaaATGGGATCAGTTCTGAGTAAGGTAGTAGTGAAATAGGATTAGGTCTGAGTAAGGAATCAATGATAATAGTGGTTAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGTCTGAGTAAGGTAGTAGTGAAATGGGATCAGGGCTGAGTAAGGCATCAATGATAATAGTAGTGATGAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGTCTGAGGAAGGTAGTAGTGAAATGGGATTGGATCTGAGTAAAGCATAAAttataatggtagtagtagtgaaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2678131 lncRNA downstream 440 1403902 ~ 1405370 (-) False G2339253
TU2678122 lncRNA downstream 12807 1390334 ~ 1393003 (-) True G2339250
TU2678116 lncRNA downstream 16296 1387851 ~ 1389514 (-) True G2339246
TU2678115 lncRNA downstream 17448 1387851 ~ 1388362 (-) False G2339246
TU2678111 lncRNA downstream 22858 1381967 ~ 1382952 (-) True G2339243
TU2678140 lncRNA upstream 11733 1418389 ~ 1421502 (-) True G2339258
TU2678146 lncRNA upstream 16015 1422671 ~ 1422910 (-) True G2339263
TU2678158 lncRNA upstream 20475 1427131 ~ 1427820 (-) True G2339267
TU2678159 lncRNA upstream 23635 1430291 ~ 1430571 (-) True G2339268
TU2678205 lncRNA upstream 43841 1450497 ~ 1451872 (-) True G2339288
XM_036972337.1 mRNA downstream 222393 1158052 ~ 1183417 (-) False LOC110516784
XR_005041780.1 mRNA downstream 321027 1083972 ~ 1084783 (-) False LOC118947123
XM_036972326.1 mRNA downstream 357631 1026745 ~ 1048179 (-) False LOC110518374
XM_036972330.1 mRNA downstream 402626 973741 ~ 1003184 (-) False LOC110513313
XM_036972322.1 mRNA downstream 447331 860243 ~ 958479 (-) True LOC110516334
XM_036972341.1 mRNA upstream 29843 1436499 ~ 1488403 (-) False LOC118947127
TU2678053 other downstream 162428 1242074 ~ 1243382 (-) False G2339205
TU2678054 other downstream 162597 1242074 ~ 1243213 (-) True G2339205
TU2678050 other downstream 170222 1235204 ~ 1235588 (-) True G2339202
TU2677994 other downstream 246239 1158547 ~ 1159571 (-) False LOC110516784
TU2677965 other downstream 283171 1107732 ~ 1122639 (-) True G2339156
TU2678190 other upstream 38305 1444961 ~ 1454271 (-) False LOC118947127
TU2678193 other upstream 42882 1449538 ~ 1454271 (-) False LOC118947127
TU2678199 other upstream 43144 1449800 ~ 1454271 (-) True LOC118947127

Expression Profile