RNA id: TU2678212



Basic Information


Item Value
RNA id TU2678212
length 379
lncRNA type intronic
GC content 0.58
exon number 4
gene id G2339291
representative True

Chromosome Information


Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1465454 ~ 1466490 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtcgctaggtgttgggtagaggtcgctaggtgttgggttgaggtcgctaggtgttgggttgaggtcgctaggtgttgggttgtggtcgctaggtgttgggttgaggtcgctaggtgttgggttgagatcgctaggtgttgggttgagatcgctaggtgttgggttgaggtcgctaggtgttgggttgaggtcgctaggtgttgggttgaggtcgctaggtgttggggtgaggtcgctaggtgttggggtgaggtcgctaggtgttgggttgaggtcgctaggtgttgggttgaggtcgctaggtgttgggttgaggtcgctaggtgttgggttgaggtcgctagGTGTTGGGgtgaggtcgctaggtgttgggttgagG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2678205 lncRNA downstream 13582 1450497 ~ 1451872 (-) True G2339288
TU2678159 lncRNA downstream 34883 1430291 ~ 1430571 (-) True G2339268
TU2678158 lncRNA downstream 37634 1427131 ~ 1427820 (-) True G2339267
TU2678146 lncRNA downstream 42544 1422671 ~ 1422910 (-) True G2339263
TU2678140 lncRNA downstream 43952 1418389 ~ 1421502 (-) True G2339258
TU2678214 lncRNA upstream 364 1466854 ~ 1471138 (-) True G2339292
TU2678215 lncRNA upstream 567 1467057 ~ 1470739 (-) True G2339293
XM_036972301.1 mRNA downstream 47671 1328898 ~ 1417783 (-) False LOC110516509
XM_036972300.1 mRNA downstream 47672 1326668 ~ 1417782 (-) False LOC110516509
XM_036972302.1 mRNA downstream 48221 1326668 ~ 1417233 (-) False LOC110516509
XM_036972337.1 mRNA downstream 282037 1158052 ~ 1183417 (-) False LOC110516784
XR_005041780.1 mRNA downstream 380671 1083972 ~ 1084783 (-) False LOC118947123
TU2678190 other downstream 11183 1444961 ~ 1454271 (-) False LOC118947127
TU2678193 other downstream 11183 1449538 ~ 1454271 (-) False LOC118947127
TU2678199 other downstream 11183 1449800 ~ 1454271 (-) True LOC118947127
TU2678053 other downstream 222072 1242074 ~ 1243382 (-) False G2339205

Expression Profile