RNA id: trnat-ugu-119



Basic Information


Item Value
RNA id trnat-ugu-119
length 72
RNA type mRNA
GC content 0.53
exon number 1
gene id trnat-ugu-119
representative True

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 921212 ~ 921283 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggcatggtggccaagcggtaaggcgtcggtcttgtaaaccgaagatcatgggttcaaatcccatatgtgcct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2680725 lncRNA downstream 114 917005 ~ 921098 (-) True G2340968
TU2680636 lncRNA downstream 101586 811254 ~ 819626 (-) False G2340897
TU2680634 lncRNA downstream 101586 812636 ~ 819626 (-) False G2340897
TU2680635 lncRNA downstream 101586 812636 ~ 819626 (-) False G2340897
TU2680637 lncRNA downstream 101586 812636 ~ 819626 (-) True G2340897
TU2680734 lncRNA upstream 12208 933491 ~ 935264 (-) True G2340974
TU2680773 lncRNA upstream 84640 1005923 ~ 1040396 (-) False G2341006
TU2680779 lncRNA upstream 86894 1008177 ~ 1013125 (-) False G2341006
TU2680778 lncRNA upstream 89370 1010653 ~ 1013125 (-) True G2341006
TU2680810 lncRNA upstream 137522 1058805 ~ 1115633 (-) True G2341021
trnaa-ugc-261 mRNA downstream 1363 919778 ~ 919849 (-) True trnaa-ugc-261
trnaa-ugc-260 mRNA downstream 3539 917602 ~ 917673 (-) True trnaa-ugc-260
trnaa-ugc-259 mRNA downstream 5176 915965 ~ 916036 (-) True trnaa-ugc-259
trnaa-ugc-258 mRNA downstream 6808 914333 ~ 914404 (-) True trnaa-ugc-258
trnaa-ugc-257 mRNA downstream 8442 912699 ~ 912770 (-) True trnaa-ugc-257
trnaa-ugc-262 mRNA upstream 672 921955 ~ 922026 (-) True trnaa-ugc-262
LOC110514453 mRNA upstream 17588 938871 ~ 948116 (-) True LOC110514453
trnat-ugu-120 mRNA upstream 84257 1005540 ~ 1005611 (-) True trnat-ugu-120
trnaa-ugc-263 mRNA upstream 84869 1006152 ~ 1006223 (-) True trnaa-ugc-263
trnat-ugu-121 mRNA upstream 86333 1007616 ~ 1007687 (-) True trnat-ugu-121
TU2680652 other downstream 106557 806890 ~ 814655 (-) True G2340905
TU2679989 other downstream 804496 116167 ~ 116716 (-) True LOC110514508
TU2679952 other downstream 858074 62414 ~ 63138 (-) True G2340407
TU2680848 other upstream 237315 1158598 ~ 1164054 (-) True G2341053