RNA id: TU2680865



Basic Information


Item Value
RNA id TU2680865
length 428
lncRNA type antisense_over
GC content 0.39
exon number 1
gene id G2341069
representative True

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 1228813 ~ 1229240 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aatacaagcaagtatggacagtcatctaacccatgaacttcagtttttgaaaatgatgcaattgaaattggcaaccatgccacttctgttccataaatgtacgaacagggattgaacacatgttcttcagattacaagagcaaatgatttagcacatctctgtttcctgctgagaatttcaacattctggaaagtaggacatgggccatcattgcaaaaatattaatggagaagctggggattgaacccaggacctcatacatgcaaagcatgcgctctaccactgagctacatcccctttctgggaaagaagaaaatgtttcttttttttttttatttcacctataattaaccaggtaagctagttgagaacaagttttcatattcaactgcgacctggccacacagagttacagatggaataaaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2680854 lncRNA downstream 44014 1184267 ~ 1184799 (-) True G2341059
TU2680824 lncRNA downstream 108055 1117761 ~ 1120758 (-) True G2341032
TU2680810 lncRNA downstream 113180 1058805 ~ 1115633 (-) True G2341021
TU2680808 lncRNA downstream 154613 1068581 ~ 1074200 (-) True G2341020
TU2680814 lncRNA downstream 164534 1059857 ~ 1064279 (-) True G2341025
XM_036972395.1 mRNA downstream 91284 1136151 ~ 1137529 (-) True LOC118947138
trnaf-gaa-211 mRNA downstream 105670 1123071 ~ 1123143 (-) True trnaf-gaa-211
trnaf-gaa-210 mRNA downstream 106766 1121975 ~ 1122047 (-) True trnaf-gaa-210
trnaf-gaa-209 mRNA downstream 108523 1120218 ~ 1120290 (-) True trnaf-gaa-209
trnaf-gaa-208 mRNA downstream 109632 1119109 ~ 1119181 (-) True trnaf-gaa-208
TU2680848 other downstream 64759 1158598 ~ 1164054 (-) True G2341053
TU2680708 other downstream 299681 878809 ~ 929132 (-) True G2340951
TU2680652 other downstream 414158 806890 ~ 814655 (-) True G2340905
TU2679989 other downstream 1112097 116167 ~ 116716 (-) True LOC110514508
TU2679952 other downstream 1165675 62414 ~ 63138 (-) True G2340407

Expression Profile