RNA id: TU2694008


Basic Information

Item Value
RNA id TU2694008
length 568
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G2350238
representative True

Chromosome Information

Item Value
chromosome id NW_023493685.1
NCBI id JAAXML020000486.1
chromosome length 631356
location 61457 ~ 62024 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tcgcaaaaaccatcaagcactatgatgaaactggctctcatgaggaccgccacaggaaaggaagacccagagttacctctgctgcagaggatacattcattagtaACCagactcagattgcagcccaaatgaatgcttcagagttcaagtaacagacacatctcaacatcaactgttcagaggagactgtgtgaatcaggccttcatggtcgaattgctgcaatgaaaccagtactaaagtacaccaataataagaagagacttgcttgggccaagaaacacgaaatctgtcctttggtccgatgagcccaaatttgagatttttggttccgaccgcagtgtctttgtgaggaagagtaggtgaacggatgatctctgcatgtgttgttcacatcgtgaagcacggaggtggtgtgatggtgctttgctggtgacactgtctgtgatttattttgaattcaatgcacgcttaaccagtatggctaccacagcattctggagcgataccccatcccatctggtttgcgcttagtgggactataatttgtttttcaacaggacaatgacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2694004 lncRNA downstream 1566 53215 ~ 59891 (-) False G2350236
TU2694006 lncRNA downstream 1566 56841 ~ 59891 (-) True G2350236
TU2694003 lncRNA downstream 3460 53215 ~ 57997 (-) False G2350236
TU2693998 lncRNA downstream 22140 39073 ~ 39317 (-) True G2350231
TU2693995 lncRNA downstream 29124 30375 ~ 32333 (-) True G2350228
TU2694009 lncRNA upstream 127 62151 ~ 62463 (-) True G2350239
TU2694010 lncRNA upstream 615 62639 ~ 62988 (-) True G2350240
TU2694011 lncRNA upstream 1123 63147 ~ 63628 (-) True G2350241
TU2694029 lncRNA upstream 24192 86216 ~ 86508 (-) False G2350255
TU2694028 lncRNA upstream 24212 86236 ~ 87579 (-) True G2350255
XM_021558667.2 mRNA upstream 320058 382082 ~ 383642 (-) True LOC110486843
XM_036972967.1 mRNA upstream 327030 389054 ~ 400830 (-) False LOC118947904
XM_036972968.1 mRNA upstream 327030 389054 ~ 400830 (-) True LOC118947904
XM_036972965.1 mRNA upstream 338880 400904 ~ 417902 (-) False LOC110486835
XM_036972966.1 mRNA upstream 338880 400904 ~ 418520 (-) True LOC110486835
TU2694039 other upstream 38593 100617 ~ 101015 (-) True G2350264
TU2694442 other upstream 265453 327477 ~ 330637 (-) False G2350576
TU2694444 other upstream 265453 327477 ~ 328152 (-) False G2350576
TU2694445 other upstream 265453 327477 ~ 329664 (-) True G2350576
TU2694447 other upstream 268688 330712 ~ 331337 (-) True G2350578

Expression Profile