RNA id: TU2694447


Basic Information

Item Value
RNA id TU2694447
length 626
RNA type TUCP
GC content 0.40
exon number 1
gene id G2350578
representative True

Chromosome Information

Item Value
chromosome id NW_023493685.1
NCBI id JAAXML020000486.1
chromosome length 631356
location 330712 ~ 331337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

atactgtactgtactactctaccatgctgttgttggtactgtactatactgtactgtactgtactgtactattctaccatgctggtgttggtactatactatactgtactgtactgtactattctaccatgctgttgttggtactatactgtactgtactactctaccatgctggtgttgatactatactgtactgtactattctaccatgctggtgttgatactatactgtactgtactactctaccatgctgttgttggtactgtactatactgtactgtactgtactgtactattctaccatgctggtgttggtactatactatactgtactgtactgtactattctaccatgctgttgttgatactatactgtactgtactactctaccatgctggtgttgatactatactgtactgtactactctaccatgctgttgttggtactgtactatactgtactactgtaccatgctggtgttggtactgcactgtactgtactactctaccatgctggtgttggtactgtactatactgtactactgtaccatgctggtgttggtactgcactgtactgtactactctaccatgctggtgttggtactatactgtactgtacta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2694446 lncRNA downstream 1474 328314 ~ 329238 (-) True G2350577
TU2694440 lncRNA downstream 4149 325859 ~ 326563 (-) True G2350575
TU2694439 lncRNA downstream 5440 324691 ~ 325272 (-) True G2350574
TU2694437 lncRNA downstream 15187 315311 ~ 315525 (-) True G2350572
TU2694408 lncRNA downstream 66473 263146 ~ 264239 (-) True G2350555
TU2694490 lncRNA upstream 92528 423865 ~ 424470 (-) False G2350618
TU2694491 lncRNA upstream 92528 423865 ~ 424470 (-) True G2350618
TU2694495 lncRNA upstream 103445 434782 ~ 435028 (-) True G2350622
TU2694496 lncRNA upstream 104052 435389 ~ 435669 (-) True G2350623
TU2694498 lncRNA upstream 105668 437005 ~ 437311 (-) True G2350625
XM_021558667.2 mRNA upstream 50745 382082 ~ 383642 (-) True LOC110486843
XM_036972967.1 mRNA upstream 57717 389054 ~ 400830 (-) False LOC118947904
XM_036972968.1 mRNA upstream 57717 389054 ~ 400830 (-) True LOC118947904
XM_036972965.1 mRNA upstream 69567 400904 ~ 417902 (-) False LOC110486835
XM_036972966.1 mRNA upstream 69567 400904 ~ 418520 (-) True LOC110486835
TU2694442 other downstream 75 327477 ~ 330637 (-) False G2350576
TU2694445 other downstream 1048 327477 ~ 329664 (-) True G2350576
TU2694444 other downstream 2560 327477 ~ 328152 (-) False G2350576
TU2694039 other downstream 229697 100617 ~ 101015 (-) True G2350264
TU2694492 other upstream 96914 428251 ~ 429561 (-) True G2350619
TU2694554 other upstream 178575 509912 ~ 510609 (-) True G2350673
TU2694541 other upstream 202902 534239 ~ 535381 (-) True G2350665

Expression Profile