RNA id: TU2694530


Basic Information

Item Value
RNA id TU2694530
length 257
lncRNA type antisense_over
GC content 0.44
exon number 2
gene id G2350656
representative True

Chromosome Information

Item Value
chromosome id NW_023493685.1
NCBI id JAAXML020000486.1
chromosome length 631356
location 494015 ~ 506260 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttcaaattgatgggaagatggatggagccaaatacaggactcctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2694498 lncRNA downstream 56704 437005 ~ 437311 (-) True G2350625
TU2694496 lncRNA downstream 58346 435389 ~ 435669 (-) True G2350623
TU2694495 lncRNA downstream 58987 434782 ~ 435028 (-) True G2350622
TU2694490 lncRNA downstream 69545 423865 ~ 424470 (-) False G2350618
TU2694491 lncRNA downstream 69545 423865 ~ 424470 (-) True G2350618
TU2694547 lncRNA upstream 9508 515768 ~ 520831 (-) False LOC118947907
TU2694548 lncRNA upstream 9508 515768 ~ 520831 (-) False LOC118947907
TU2694549 lncRNA upstream 9508 515768 ~ 520831 (-) True LOC118947907
TU2694561 lncRNA upstream 33901 540161 ~ 540765 (-) True G2350679
TU2694568 lncRNA upstream 49398 555658 ~ 557973 (-) True G2350686
XM_036972966.1 mRNA downstream 75495 400904 ~ 418520 (-) True LOC110486835
XM_036972965.1 mRNA downstream 76113 400904 ~ 417902 (-) False LOC110486835
XM_036972967.1 mRNA downstream 93185 389054 ~ 400830 (-) False LOC118947904
XM_036972968.1 mRNA downstream 93185 389054 ~ 400830 (-) True LOC118947904
XM_021558667.2 mRNA downstream 110373 382082 ~ 383642 (-) True LOC110486843
XM_036972992.1 mRNA upstream 7346 513606 ~ 522862 (-) False LOC118947907
XM_036972991.1 mRNA upstream 17062 523322 ~ 568570 (-) True LOC110486820
XM_036972978.1 mRNA upstream 87196 593456 ~ 604197 (-) False LOC110486817
XM_036972979.1 mRNA upstream 87196 593456 ~ 604197 (-) False LOC110486817
XM_036972982.1 mRNA upstream 98193 604453 ~ 607145 (-) True LOC110519423
TU2694492 other downstream 64454 428251 ~ 429561 (-) True G2350619
TU2694447 other downstream 162678 330712 ~ 331337 (-) True G2350578
TU2694442 other downstream 163378 327477 ~ 330637 (-) False G2350576
TU2694554 other upstream 3652 509912 ~ 510609 (-) True G2350673
TU2694541 other upstream 27979 534239 ~ 535381 (-) True G2350665

Expression Profile