Fish Transcriptome and Expression Database

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economic fish

RNA id: TU2705551

Basic Information

Item	Value
RNA id	TU2705551
length	229
lncRNA type	intronic
GC content	0.43
exon number	2
gene id	G2358654
representative	True

Chromosome Information

Item	Value
chromosome id	NW_023493711.1
NCBI id	JAAXML020000834.1
chromosome length	346706
location	267000 ~ 300253 (-)
genome version	USDA_OmykA_1.1_2020_rainbow_trout_Genome
species	rainbow trout (Oncorhynchus mykiss)

Sequence

cacacacttgaacatACACTTGAATCTCTCATTTGGTGGTAAATTCTCTATAGCTGCATCTTGTAGCTTAGCAACAGGTCTGAGAgacattgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgttttattaatTTGGGCAGTGAGGTGTGCGCTCAGTCAAAATGGCACCTCTAATTATGTTCCCTGGGATTAGCTGATAGATTTCTGCTGCAGAc

Function

GO: NA

KEGG: NA

JBrowse2

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

RNA id	RNA type	direction	distance	location	representative	gene id
TU2705545	lncRNA	downstream	14297	252322 ~ 252703 (-)	True	G2358648
TU2705527	lncRNA	downstream	46247	217442 ~ 220753 (-)	True	G2358639
TU2705511	lncRNA	downstream	92051	174621 ~ 174949 (-)	True	G2358629
TU2705504	lncRNA	downstream	104726	161308 ~ 162274 (-)	True	G2358623
TU2705497	lncRNA	downstream	109477	157088 ~ 157523 (-)	True	G2358618
TU2705474	other	downstream	147596	119190 ~ 119404 (-)	True	G2358603
TU2705313	other	downstream	247549	19096 ~ 19451 (-)	True	G2358484

Expression Profile