RNA id: TCONS_00060039


Basic Information

Item Value
RNA id TCONS_00060039
length 117
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_030880
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 12192898 ~ 12193014 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCACAGCCGTATCACCCTGCTGCTCAACACTGgttgctcactgaagctaagcaggcctGAGCCTGGTCTTtagctggatgggagaccacataagaAAACTAGGTTGCTATTGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000179702

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00060032 lncRNA downstream 174210 12010828 ~ 12018688 (-) False XLOC_030876
TCONS_00061954 lncRNA downstream 529570 11576673 ~ 11663328 (-) True XLOC_030871
TCONS_00061953 lncRNA downstream 529670 11576673 ~ 11663228 (-) False XLOC_030871
TCONS_00061952 lncRNA downstream 529842 11576673 ~ 11663056 (-) False XLOC_030871
TCONS_00061951 lncRNA downstream 586188 11576673 ~ 11606710 (-) False XLOC_030871
TCONS_00061955 lncRNA upstream 79123 12272137 ~ 12279939 (-) False XLOC_030879
TCONS_00060040 lncRNA upstream 79123 12272137 ~ 12280127 (-) False XLOC_030879
TCONS_00061527 lncRNA upstream 642512 12835526 ~ 12836607 (-) True XLOC_030888
TCONS_00060062 lncRNA upstream 938385 13131399 ~ 13167120 (-) True XLOC_030890
TCONS_00061956 lncRNA upstream 1084227 13277241 ~ 13306705 (-) True XLOC_030893
TCONS_00060035 mRNA downstream 99280 12065957 ~ 12093618 (-) True XLOC_030878
TCONS_00060034 mRNA downstream 129517 12032802 ~ 12063381 (-) True XLOC_030877
TCONS_00060033 mRNA downstream 161724 12030872 ~ 12031174 (-) True XLOC_030876
TCONS_00060030 mRNA downstream 220952 11965113 ~ 11971946 (-) True XLOC_030875
TCONS_00060028 mRNA downstream 248500 11917575 ~ 11944398 (-) False XLOC_030874
TCONS_00060041 mRNA upstream 79618 12272632 ~ 12525441 (-) False XLOC_030879
TCONS_00060042 mRNA upstream 90083 12283097 ~ 12525441 (-) False XLOC_030879
TCONS_00060043 mRNA upstream 92712 12285726 ~ 12407194 (-) False XLOC_030879
TCONS_00060046 mRNA upstream 310480 12503494 ~ 12524996 (-) True XLOC_030879
TCONS_00060047 mRNA upstream 356537 12549551 ~ 12560569 (-) True XLOC_030882
TCONS_00060031 other downstream 160977 11982364 ~ 12031921 (-) False XLOC_030876
TCONS_00060014 other downstream 1468233 10720894 ~ 10724665 (-) True XLOC_030863
TCONS_00060013 other downstream 1684084 10507826 ~ 10508814 (-) True XLOC_030862
TCONS_00059993 other downstream 2987007 9203723 ~ 9205891 (-) False XLOC_030847
TCONS_00059992 other downstream 3005992 9179822 ~ 9186906 (-) False XLOC_030847
TCONS_00060044 other upstream 160707 12353721 ~ 12372897 (-) False XLOC_030879
TCONS_00060045 other upstream 173195 12366209 ~ 12366325 (-) True XLOC_030881
TCONS_00060054 other upstream 531448 12724462 ~ 12725315 (-) True XLOC_030886
TCONS_00060061 other upstream 917921 13110935 ~ 13120593 (-) False XLOC_030890
TCONS_00060070 other upstream 1339860 13532874 ~ 13532988 (-) True XLOC_030896