RNA id: TCONS_00060045



Basic Information


Item Value
RNA id TCONS_00060045
length 117
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_030881
representative True

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 12366209 ~ 12366325 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


AGCCACAGCTATAACACCTTGTaacccaagactggttactcactgaagctatgcAGAGCTGagcttggtcagtacctggatgggagaccccATCGataaactaggttgctgttggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176045

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00060040 lncRNA downstream 86082 12272137 ~ 12280127 (-) False XLOC_030879
TCONS_00061955 lncRNA downstream 86270 12272137 ~ 12279939 (-) False XLOC_030879
TCONS_00060032 lncRNA downstream 347521 12010828 ~ 12018688 (-) False XLOC_030876
TCONS_00061954 lncRNA downstream 702881 11576673 ~ 11663328 (-) True XLOC_030871
TCONS_00061953 lncRNA downstream 702981 11576673 ~ 11663228 (-) False XLOC_030871
TCONS_00061527 lncRNA upstream 469201 12835526 ~ 12836607 (-) True XLOC_030888
TCONS_00060062 lncRNA upstream 765074 13131399 ~ 13167120 (-) True XLOC_030890
TCONS_00061956 lncRNA upstream 910916 13277241 ~ 13306705 (-) True XLOC_030893
TCONS_00061528 lncRNA upstream 2154797 14521122 ~ 14522712 (-) True XLOC_030909
TCONS_00061957 lncRNA upstream 2414517 14780842 ~ 15176038 (-) False XLOC_030911
TCONS_00060038 mRNA downstream 93520 12100669 ~ 12272689 (-) False XLOC_030879
TCONS_00060037 mRNA downstream 142775 12100669 ~ 12223434 (-) False XLOC_030879
TCONS_00060036 mRNA downstream 146637 12100126 ~ 12219572 (-) False XLOC_030879
TCONS_00060035 mRNA downstream 272591 12065957 ~ 12093618 (-) True XLOC_030878
TCONS_00060034 mRNA downstream 302828 12032802 ~ 12063381 (-) True XLOC_030877
TCONS_00060046 mRNA upstream 137169 12503494 ~ 12524996 (-) True XLOC_030879
TCONS_00060047 mRNA upstream 183226 12549551 ~ 12560569 (-) True XLOC_030882
TCONS_00060048 mRNA upstream 195863 12562188 ~ 12587053 (-) True XLOC_030883
TCONS_00060049 mRNA upstream 271498 12637823 ~ 12687357 (-) False XLOC_030884
TCONS_00060050 mRNA upstream 271498 12637823 ~ 12701603 (-) True XLOC_030884
TCONS_00060039 other downstream 173195 12192898 ~ 12193014 (-) True XLOC_030880
TCONS_00060031 other downstream 334288 11982364 ~ 12031921 (-) False XLOC_030876
TCONS_00060014 other downstream 1641544 10720894 ~ 10724665 (-) True XLOC_030863
TCONS_00060013 other downstream 1857395 10507826 ~ 10508814 (-) True XLOC_030862
TCONS_00059993 other downstream 3160318 9203723 ~ 9205891 (-) False XLOC_030847
TCONS_00060054 other upstream 358137 12724462 ~ 12725315 (-) True XLOC_030886
TCONS_00060061 other upstream 744610 13110935 ~ 13120593 (-) False XLOC_030890
TCONS_00060070 other upstream 1166549 13532874 ~ 13532988 (-) True XLOC_030896
TCONS_00060083 other upstream 1878824 14245149 ~ 14245280 (-) True XLOC_030905
TCONS_00060087 other upstream 2001775 14368100 ~ 14372936 (-) True XLOC_030906