RNA id: TCONS_00060495


Basic Information

Item Value
RNA id TCONS_00060495
length 551
RNA type processed_transcript
GC content 0.49
exon number 2
gene id XLOC_031147
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 30390893 ~ 30392592 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAATATGGTACTGATCCATCTCCAGCGACGTTGACAGAGACGAAGACTTTACAGGATCCTGTTCCATCATCTTTAGCCCAGGATGTAGTGTCACTGAGAGACACCACTCCACCACTGGCCTCCTCTGAAGTGACGGCTGTCATCTTCACCACAGCCAGATCTCCAGGAGTCGACATGTACGGTGGGCAGGAGTAGCTGGAGGCAGAGGTGTAAGATGGTGCTGTGTATGGGACGTCCTCCAGAGGCTGTAGAGTATATGGCTGAGAGCTGGATGGGATGGAGCTCCCACTCCGACCAGAGGTCAGACGGTACGGAGAGGAACTGCCTGAGTCAGGCCCAGCTAGGGATGGTGAGTCTGCCACGGGGGCTGCAGCCTCAGGACATAAGACTTCTGTCTGATTGACCGAGTCCTCTGATGGCTGATCCCATGGGTCTCTCTGTAGCATAGAGAAACATCATTGCTTAGTAATATTTTCACTTAAATGGGTTTTGCTccatctattaatttatttaaaaatatgtttctgcatttaaataaaatgtcataaata

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000145176

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00062024 lncRNA downstream 339335 30036486 ~ 30051558 (-) True XLOC_031140
TCONS_00062023 lncRNA downstream 489790 29896636 ~ 29901103 (-) True XLOC_031139
TCONS_00062022 lncRNA downstream 636554 29746319 ~ 29754339 (-) False XLOC_031136
TCONS_00060479 lncRNA downstream 719276 29670040 ~ 29671617 (-) True XLOC_031135
TCONS_00062021 lncRNA downstream 797372 29589820 ~ 29593521 (-) True XLOC_031133
TCONS_00062025 lncRNA upstream 689747 31082339 ~ 31113121 (-) True XLOC_031161
TCONS_00062026 lncRNA upstream 873682 31266274 ~ 31269164 (-) False XLOC_031162
TCONS_00062027 lncRNA upstream 873682 31266274 ~ 31274665 (-) True XLOC_031162
TCONS_00062028 lncRNA upstream 1282061 31674653 ~ 31676807 (-) True XLOC_031165
TCONS_00062029 lncRNA upstream 1298498 31691090 ~ 31692364 (-) True XLOC_031166
TCONS_00060494 mRNA downstream 7968 30381936 ~ 30382925 (-) True XLOC_031146
TCONS_00060493 mRNA downstream 10300 30351233 ~ 30380593 (-) True XLOC_031145
TCONS_00060491 mRNA downstream 213923 30155834 ~ 30176970 (-) False XLOC_031144
TCONS_00060492 mRNA downstream 214544 30159010 ~ 30176349 (-) True XLOC_031144
TCONS_00060490 mRNA downstream 239078 30131286 ~ 30151815 (-) True XLOC_031143
TCONS_00060496 mRNA upstream 21658 30414250 ~ 30418636 (-) True XLOC_031148
TCONS_00060497 mRNA upstream 34606 30427198 ~ 30475011 (-) False XLOC_031149
TCONS_00060498 mRNA upstream 34606 30427198 ~ 30481263 (-) False XLOC_031149
TCONS_00060500 mRNA upstream 34606 30427198 ~ 30487822 (-) False XLOC_031149
TCONS_00060499 mRNA upstream 34606 30427198 ~ 30487822 (-) False XLOC_031149
TCONS_00060456 other downstream 1238459 29149201 ~ 29152434 (-) False XLOC_031122
TCONS_00060435 other downstream 1837139 28552987 ~ 28553754 (-) True XLOC_031114
TCONS_00060430 other downstream 2349183 28037942 ~ 28041710 (-) False XLOC_031109
TCONS_00060419 other downstream 3296555 27094224 ~ 27094338 (-) True XLOC_031102
TCONS_00060418 other downstream 3343029 27039024 ~ 27047864 (-) True XLOC_031101
TCONS_00060513 other upstream 536455 30929047 ~ 30930288 (-) True XLOC_031158
TCONS_00060528 other upstream 1289707 31682299 ~ 31689866 (-) True XLOC_031164
TCONS_00060550 other upstream 1736890 32129482 ~ 32130516 (-) False XLOC_031178
TCONS_00060551 other upstream 1736971 32129563 ~ 32131437 (-) True XLOC_031178
TCONS_00060554 other upstream 1742610 32135202 ~ 32136421 (-) True XLOC_031179

Expression Profile

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