RNA id: TCONS_00060612



Basic Information


Item Value
RNA id TCONS_00060612
length 72
RNA type snoRNA
GC content 0.40
exon number 1
gene id XLOC_031209
representative True

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 33285526 ~ 33285597 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TGCAGATGATGTGAAGAATATTTGCTATCTGAGTAGTAAATGCGGACAGTTTCCACCAAGATCActgatgca

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000115680

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00060599 lncRNA downstream 11111 33269436 ~ 33274415 (-) False XLOC_031207
TCONS_00062041 lncRNA downstream 357607 32922656 ~ 32927919 (-) True XLOC_031200
TCONS_00062040 lncRNA downstream 361957 32922656 ~ 32923569 (-) False XLOC_031200
TCONS_00062039 lncRNA downstream 399652 32885179 ~ 32885874 (-) True XLOC_031198
TCONS_00062038 lncRNA downstream 500726 32782667 ~ 32784800 (-) True XLOC_031195
TCONS_00062042 lncRNA upstream 1916969 35202566 ~ 35206296 (-) True XLOC_031225
TCONS_00060651 lncRNA upstream 2237812 35523409 ~ 35540980 (-) False XLOC_031229
TCONS_00060652 lncRNA upstream 2241160 35526757 ~ 35540895 (-) True XLOC_031229
TCONS_00060655 lncRNA upstream 2439950 35725547 ~ 35728227 (-) True XLOC_031230
TCONS_00062043 lncRNA upstream 3536277 36821874 ~ 36829073 (-) True XLOC_031238
TCONS_00060603 mRNA downstream 4370 33275150 ~ 33281156 (-) False XLOC_031207
TCONS_00060604 mRNA downstream 4480 33275164 ~ 33281046 (-) True XLOC_031207
TCONS_00060600 mRNA downstream 4827 33272414 ~ 33280699 (-) False XLOC_031207
TCONS_00060598 mRNA downstream 10543 33266410 ~ 33274983 (-) False XLOC_031207
TCONS_00060614 mRNA upstream 10081 33295678 ~ 33298352 (-) True XLOC_031211
TCONS_00060615 mRNA upstream 70828 33356425 ~ 33460959 (-) True XLOC_031212
TCONS_00060616 mRNA upstream 252192 33537789 ~ 33607062 (-) False XLOC_031213
TCONS_00060617 mRNA upstream 287737 33573334 ~ 33606729 (-) True XLOC_031213
TCONS_00060618 mRNA upstream 393962 33679559 ~ 33825465 (-) False XLOC_031214
TCONS_00060611 other downstream 543 33284908 ~ 33284983 (-) True XLOC_031208
TCONS_00060608 other downstream 900 33284556 ~ 33284626 (-) False XLOC_031208
TCONS_00060593 other downstream 52760 33231864 ~ 33232766 (-) False XLOC_031204
TCONS_00060574 other downstream 888617 32395893 ~ 32396909 (-) True XLOC_031189
TCONS_00060558 other downstream 1115240 32170170 ~ 32170286 (-) True XLOC_031181
TCONS_00060613 other upstream 990 33286587 ~ 33286658 (-) True XLOC_031210
TCONS_00060621 other upstream 499263 33784860 ~ 33825471 (-) False XLOC_031214
TCONS_00060622 other upstream 511401 33796998 ~ 33865200 (-) True XLOC_031214
TCONS_00060627 other upstream 856996 34142593 ~ 34150122 (-) True XLOC_031217
TCONS_00060628 other upstream 952310 34237907 ~ 34238023 (-) True XLOC_031218