RNA id: TCONS_00060685


Basic Information

Item Value
RNA id TCONS_00060685
length 7912
RNA type mRNA
GC content 0.44
exon number 7
gene id XLOC_031253
representative False

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 37864705 ~ 37881345 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGCGCCACTGGGCGAGTCTCGGCTGTCTCAGTAACCCTCCTTTATCCTCAAAAAAGGAGAGCGAAAGAGGGCAGACTCGGAGTTGGGCTCGGGCGGAGGGACCGCCATTATCGGGAGGCTTGGGCAACCACTTTCGCCCTCGCGCAGAATGTACACATCTTAGCATTTCAAAGACACGCGTGGTCCAGATTGCTCGTGATTTGGCAACGAAAAACTGGATGTTGGGTCTCAGTGTAAAGGCATCGCTGCATGCTGTCTGCACACGGCGAAATCAGCGTTTTATGGCCACAACAAAGGGCATTATAATTGATCAAATCCAACGTGCTTAGGCCGGAGGAAGAATTAAAAACAAGCCTTTTTCAACACGGAAACGACTGGCCTCCAAGAACGGACATTTCTTTGTTTGGATATGTTAGCCGTCGCTGGATTTCCACAGCCGTTTCTATGCGAACGCGAGATCTGTAAGTTGCGCCTGACAAAAATATCCCCTGGAAACTGCAAGTCTGTCAAGCCACAGTCAAAGAGCCCCCGGGGAATCTAACGTCCTCTGCTTTTTACCTAGtcttttgtttgcttttatttctgGTTTCCAACAACATTGGCCGAGCCGGTGGTAAGCCCTCTCGCGGTGGCCTGGCCGAGGAAAGAGGGATTGAGCAGGGAGAAGAAGGACGTAGAAAGGCACTGGTTGGCCCCAATTCCTGCCCCGCTTCATCAGGCCCCTCTCTTATCACTGATTAGTCCCCTTTAAAATGGGCAAAACATGCAAGCAGTTTACTTGATCTGAAAGGATGACTAAAAAATCTGAACTAAGGCCTCAATTTTAAATCAAATACCGGGCCCCTTGACTTTAACATTTTATGGACACATTTTAAAGAGTCTGCCTCTGTCAGCCTTTGGGGCATGGCAAGATGAATGCCTGTGTACGATGATGATGGCTAAAAAGCAAGAATCCCGGCTGCCAATCTACAACCTTGTTGTTGTTGGCCTGTCGGGAACTGAGAAGGAGAAAGGGCAATGTGGAGTTGGCAAATCTTGCCTTTGTAATCGCTTTGTTCGCCCTAGTGCAGATGACTTCCATCTCGATCACACCTCTGTGCTAAGTACTAGTGACTTTGGTGGCCGGGTTGTCAACAATGACCATTTCCTGTTCTGGGGGGAGGTTGGGAGAGTTTTGGAGGATGGTGCAGACTGCAGAATGCATGTGGTCGAGCAGACAGAATTTATTGATGACCAGACTTTCCAGCCCCATCGTAGCACAGCCTTACTGCCCTACATCAAAAGAGCTGCCTCCACCAAATTGGCTTCTGCGGAAAAACTCATGTACTTCTGCACTGATCAGTTGGGCCTGGAGCAGGACTTCGAACAGAAACAAATGCCTGAAGGCAAGTTGCAGGTCGATGGCTTTCTGCTTTGTGTTGATGTCAGTCGTGGTATGAACCGCAACTTTGATGATCAAATGAAATTTGTCACCAACTTGTACAATCACTTAAGCAAGACAAAAAAGCCTATTGTGCTGGTTCTCACCAAGTGTGATGAGGGTGTGGAGCGATACATCAAGGATTCTCATACCTTTGCCATTACAAAAAAGAACCTGCAAGTTGTTGAGACTTCGGCTCGATCCAATATCAATGTTGACTTGGCTTTTCTTACCTTAATTCAACTCATTGATAAGGGAAAAGGTAAGCCTAAGATCATACCTTACTTTGAGGCATTGAAACACCAGAGTCAACTGATTGCCTCCGCAAAAGACCGCTATGAATGGTTGGTGAACCACATTGTGAAGAATCACAATGAAACTTGGCCAAACGTCAGCAGACGTATGCAGACTTCACCCGAATATAAGGAATATGTGTTTTTAGAAGGCACAGGTAAAGCTAAGAAACTATTTCAACAGCACATTCACCGACTTAAACAAGAGCATACTGAAAGACGTCGTAAAGCATACTTGAGTGCTCTTCCACTCGCCTTAAGTAGCTTGGTGTCGGAGTTGGATGAAATTGAGCATTTAAGCTGGTCTGGGGTGCAAAAAGTGCTTGAGTCTAAAAAAGACTTTGATCATTGGTTTGTGGTACTGGACGATGCACCATGGGAAGACACACCACATCTTGACAATATGGAGGATGACCGCATCCCCTTTGATGTGCTAGACACCACGGCTGCTGAAATCCTCTTTGATGCACACCTTGAACACTTGCGCAATGAATGCAAGCGTGCCCAGATGCGTCATGAGTTCAAAGGAAAATTAGCATCTTCACCTTTCGTTACTCCAGGCAAGCCCTGGGAGGAGGCTCGAAGCTTCATCATGAATGAAGACTTTTACCAGTGGCTTGAGGAGCCAGAATATTTGGACATTTATAACCGTCACCAGAAAGCAATCATTGACAGGGCAAAAGAGGATTTTCAGGAGCTTCTGCTGGAGTACTCTGAACTCTTCTACGAACTTGAGGTGGATGCCAAACCTAGTAAAGAGAAAATGGGAGCAATTCAAGAAGTGTTAGGTGAAGAACAACGCTTCAAGGCACTTCAGAAACTGCAAGCTGAAAGGGATGCTTTAGTACTGAAACACATCCATTTTGTTTATCACCCTACGAAGGAAACATGCCCAAACTGCCCACACTGTGTTGACAGCAAAATTGAGCAAATTCTAGCTTCATGCTTCCCTGCACAATATCCTTCCTTTGGAAAGTCGCATATAACTGATGCAAAGGTAGATAGGATCAATCTTGTTATACTGGGTAAAGATGGACTTGCTAGAGAATTAGCCAATGAAATTCGGGCACTGTGTACTAATGATGATCATTATGTGCTTGAAGGAAGAATGTATGAGCTTGTCCTTCGGCCAATTGAGGGCAATGTTAGACTTCCTGTTAATTCGTTTCATACATCCACATTTACTCCCCATGGATGCCTGTGTTTGTACAATTCAAAAGAGTCCTTGTCCTATGTTGTAGAAAGCATTGAGAAGTTGCGAGAGTCCACACTTGGCAGAAGGGACAACCATATGGCTCAGCTTCCGTTGTCCCTCTTATTGGTAAGCAAAAGAGGTGTTGGAGGACTGAGTGATATTGGTGGTGAGACTGCTCAAGCGTTAATCTCACAGGGTCAGCAAGTAGCCATAAAACTGCAGTGTAACTACCTGGAACCTTCCTCCCCAGGCACTGGTTATGGGCGAAACGTGAATGAAAAGCAGATCAACCAGGTTTTGAAAGCTCTACTTGAAACAAGGAGGACTTCTACATTTCGTAGCTGTTCTCCACCTGCACCTCCACTGCCTCCATGTATTCGAGACTTTCAGCAAGACCAGAGCCCAGAGGCTGATTTGCGTATCGTCATGTGCCTAATGTGTGGAGACTCTTATGACATCGATCAACTTCTTGCACCATTCCTGCTGCCTCAGCATTGCAAGCCAACTTCTCCCCAGACAAGTGGCACTTCAGTGCTGCTAGAACAAACAATTGGTGGCCACAAGCTTACGATTGAGCTTTCTCTGCTGTCTTACCACTCTTCTTTTGCTACTCGGAAGAGTCGACTGGTGCATGGCTACATAGCTGTATATTCTGCTAGCCGCAAGGCTTCTTTTGAAACCCTGTGTGCCTTTTTGTGTGAGGTTCAGGACATCATCCCGGTACAGATGATTGCAGTGGGGGAAACACAGATTGAGCTTCAGGACTCTGAGTCTGCTCGTGAATTGTTAGTCCAAGGTGAAGAGCTGGCACATGAACTTGAAGGACGATTTGGCAGTATTGTCTGTGGTCATGGCGGCGTTGTTGGAGGACTACACAAACTAGACCTTTTAGAACAATTTTTCACAGAAGTATTAGAAAAGAAAACCATAGTTGAAGCCAGCCATATGTATGAAAGCATGGCAGAAGCCAGTAGCACAAATGAGAATGTGTATTCGCCACACTGTGGCTCCCCAAGCCCTGTCACAATGCTGTTAGATTCTGAGGAAGACATGGAAGCTTCCCCGCCTTACCATGATGGCACACTTACCTCTCACGGTGGATTCAAACTGCCTGACCTGGACTCAGGTGACACATTCTCTGTGATCTCTGACCTTAGCACCTTTGAGAACAAGCTAAATAATAAAGTTCCTCCACAAGTGAGACCCAAACCTAGTGTCACATTTGACCTTAGAAAGCCAAGTTTTAACCCCTATGTGGATGGAGTCAGCCACCGCCGTTCCCTCACATCCAATGTGACGTGGCCTCTAGGAGGAGATTATGATCCTTCAGACTATGCTGAGCCAATGGATGCTGTCTCTAAGCCACGCCCCAGCTATGAAGACAGCATATATTCTGTGCCTCATGACAGCACACAAGGTAAAATTATTACTATACGCAATTCAAATCGAATCCACTCCAACGGAGGAGGAAATGGTTCAGACAGTGAAGGGGATGGCAGCTCATTGGAGAGACGTCGCAAGTTTTCAGCAGCAAGGGTTAAGCCACGGCTTTACCGTGATCGTTCCAAACGTCTGGGGAAGTTCAGCAGTTTCCGCACTAGTTTCTCTATTGGTAGCGATGATGAGATTGGCACACTCTCAAGGTCAAAAGAGGATGATGTTTCACCACTGAAGACAGATATAACAAATGAAGAAGGAGAAGATCCCAAAAAGAGAAACATCCTGAAAAGTCTCCGCAGACCAGGCAAAAAAGCAAGACCAAAGCCTCGTCATTCCATCTCTAAGCCTTTGGAGAGTAACTACTTTGGAGTGCCTCTGGTCAATGTTGTTTCCTTCGAACGACCTATTCCAGTTTTCATTGACAAGTGTATTCGTTATATTGAAGCCACAGGGTTAACAACAGAGGGTATCTACAGGGTAAGTGGGAATAAGGCGGAGATCGAGGGCATGCAGAGGCAGTTTGAACAGGACCACAATCTGGACTTTGTGGAGAAGGACTTCACTGTGAACACAGTTGCCGGGGCAATGAAAAGTTTCTTCTCTGAGCTGCCTGATCCTCTGGTTCCTTACAGTTCACAGGAGGAGCTGGTGGAAGCTTTCAAAATTAATGATCGAGAACAGAGACTTCACACAATGAAGGACGTGTTAAGACGATTTCCCAGGGAGAATTTTGATGTCTTCAAGTATGTAATGAGCCATCTAAACAAgGTTGGTCAGTGGAACAGAGTCAACTTAATGACCAGTGAGAATCTCTCCATCTGTTTCTGGCCAACACTGATGCGGCCAGACTTCACTTCTATGGATGCCCTGACCGCCACACGCACCTACCAGACAATCATCGAGACGTTTATCCATCAATGTGCTTTCTTCTTTTACAACCAGCCTCCTGCTGAATCGCCCACTGGCCTATTCGGCCAGCCTGGACCAATGGTGCCCTGTGGATTGCCCCCATCCCCCACAGCTGCTCCTTCTTATTGCCCTTCGACCCCACATTTTACCCCTCTTCTTCAGTCCCCGCCTCATTCTCCCCCCCAGAGCCCACACTCCGCCCCTGCAGAACCACAAACACTGTGAGCTGGGGGACAATAAATGATGTGGCCCGTTATTTAACCATACATACACTCAGATACGTCAATGCATGCTTACACATCTAcatacacagacacgcacacacacacagacatatctAAATGCCTCTAAAACATGTAGCTTGTTTTGGTCAGTGTTTGTGAAAAAGTTGAGCTCTCAGTACTTGCTGTACATCAGGGATGCTCAAGACCTTTCTGCTGCGTTTAGTTCCAACCTGCTCTGAAAAACGTCTGTAATTTTTAATGTACCCCAAAACCTCAGtttcgggtgtgtttgattagtatCTAAACTCTTTATAGGACTGCAGTTATTAACACATATCACACACCAGACAAAGGTCTGTGCGCTTATGAACTCTTGAACATTGTAACCAACAAAGACTCCAATCACCTCCATGTCGTTTATTACAGAAGGGGGACGCCGGTGTCATTTCATGAGAGCGAATATACAGTAGCTGTTCTAATCAAGAAGGATATGAGTTATTTTGAAGGATCTTCTCTTCCTCTCCTTAGAAGGTGATcaattttgcaacaattttaaaccCAGTTTTGTTCTATTGTCATCTCTATTTGGATCTATTAGGACACTATTGTCATAAAAAAACCATGAAGCACTTACACGTTCAACCTTTCATCATTTTATGGAGAATAATAGAATGACCTCttccttattttctttcttttaagaaGATGAATGAAATCACTTTAGCTGCAACCATATTCACCACTTTGCCTGGCTGTTGTTCCACTTTACCGTCCGCCATGCCTCTGTATGTTAAGTTACAAACACCAAGTATCCAGTGGATTTTGGAGGATGTTTGTTGTGAATTGCCAGCTTTGAAGACTTGAAGCTCTGATAGGCTAGAAGGTGATGTCGATGAGGATTTGCTTTGCTGAAAGTCTCCTGTGGATCCCGGCTCATAAATTCACCTAATGGGAGTGTGTGTGCCCTTTCTTTGAAGGCTGGGATTTAAATGGCAGCGGTATCACGTGGTTTTAGGGAATGCACTTCCAGTTAGCGCTGGTGAAGGGCTCAAGATCACTGAGACTGCAGATTTACTTCGACCCTTAAACTCTTTTGAGTCAGCAGCTCAAAACCCTCACACCTTAATTTTGAACTCatggtattaaaaaaaaatcaagattaaGGCCTTTTTTTCTGATGCCCAgtctgactgttttaaaaaatgtcattgtttttACTTTATCTAAAGCACTTTTTCGTCTTTTTATATAGACCTGTGAACGCTGGCACTGACTGATGATTGGtttcgatttttttatttttttttttgccatcaaTGTTTAAAAGATCAATGAACTTGAAGGTGAATGTGGAGCAGTCACAGATTAAGCCTAATCTTGGTCAAAAGTTGACTCTTGATGATTCTGCATTCATTAGCTTGTCTTTTGTCTACTGTCATGCACTTAGATCTCTTGTACAGCCTGAACGTTAATCACCATTTTCCCTTTTGTCATCTGCATTTAAcgaaaatcaaatgactcagttTATCTCTTGTTCTGCTTTCACCATCTCAATCTGTCTGAAATCCTTCTGGACAAATCCATAATGTATAAAGACGCGACTGATTGAGTGTAGATTGTATGTATATTACCATaatacctttatttaatttttttctcttaaacCGCAAAGCTTCTGCTGTGAAGGAAATTATTCCTAAGCATAATTTTGCTTGAAGTGTCACTTCCTATTTCTATCCAGCCAAGGTAGAAAAGCTGAAGTACCAAAGTAGTGCAATGTGGTTGAAGAGGGTTCAACACCAGTTGTAAATATTTTGATGACGGGTTTGGAATGAGTTATGTCGGATTCAACAAATAGTATTTGACAAATAGTCCAAATGGTGAAACTTTGATGATTTGAACACGCTTTCGTTCATGGTCCTTTTCGTTCTGCGTATCTGCTGCTTTTCTACCAGGCTGAGAAAGACTGAAAGAATCCCAACGTTACTTGaagaatgctgtttttctttcaatATTGAGATGCAGCTTGAAATTTCTAGGATTACCAACTCATTTCAGCCAtctgtatgtgggtgtgtgtgtgtgtgtttatttgtaagaatacaAGCTAATGTAATTAGTCATGAAAAGGATGGGTAACTGTGATGACGGTAATCATAATGGTTAAAAGAATTGAGGCCATTCAAGAGTGCCACAAAATGTTCTATTATGTAGAAGTGTTTGTAGAAGTAGAGCTTCTTTGGATTTGTAACTTTGCTTTtgatctaaagtactgagtactTGCTAATTTTCTGTCTGCTGTTACATTGTGTTAAGCCCAGAATGTGGAATAATTTGAAGTCATTCAAACAATTGAAGTGTGCACTGTTGCACCTCACCAAACCTGACCTGCTGAGTTTACTTACCTGGAATAAATGAACGTGCCCTATA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-44 Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within signal transduction. Orthologous to human ARHGAP35 (Rho GTPase activating protein 35).

Ensembl:

ensembl_id ENSDART00000084819

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00062049 lncRNA downstream 152855 37708702 ~ 37711850 (-) True XLOC_031251
TCONS_00061540 lncRNA downstream 260970 37592276 ~ 37603735 (-) True XLOC_031250
TCONS_00062048 lncRNA downstream 381685 37480447 ~ 37483020 (-) True XLOC_031249
TCONS_00062047 lncRNA downstream 381978 37480447 ~ 37482727 (-) False XLOC_031249
TCONS_00062046 lncRNA downstream 592394 37266944 ~ 37272311 (-) False XLOC_031247
TCONS_00061541 lncRNA upstream 9432 37890777 ~ 37894891 (-) False XLOC_031255
TCONS_00061542 lncRNA upstream 224107 38105452 ~ 38106799 (-) True XLOC_031262
TCONS_00062050 lncRNA upstream 368699 38250044 ~ 38255700 (-) False XLOC_031269
TCONS_00060719 lncRNA upstream 368699 38250044 ~ 38255744 (-) True XLOC_031269
TCONS_00062051 lncRNA upstream 733523 38614868 ~ 38633719 (-) True XLOC_031276
TCONS_00060684 mRNA downstream 43827 37817870 ~ 37820878 (-) True XLOC_031252
TCONS_00060683 mRNA downstream 523661 37316683 ~ 37341044 (-) True XLOC_031248
TCONS_00060679 mRNA downstream 612594 37132016 ~ 37252111 (-) False XLOC_031246
TCONS_00060678 mRNA downstream 617051 37132016 ~ 37247654 (-) False XLOC_031246
TCONS_00060688 mRNA upstream 2677 37884022 ~ 37886077 (-) False XLOC_031254
TCONS_00060689 mRNA upstream 3211 37884556 ~ 37886063 (-) True XLOC_031254
TCONS_00060690 mRNA upstream 6750 37888095 ~ 37900350 (-) False XLOC_031255
TCONS_00060691 mRNA upstream 6769 37888114 ~ 37900395 (-) False XLOC_031255
TCONS_00060693 mRNA upstream 12126 37893471 ~ 37900395 (-) True XLOC_031255
TCONS_00060682 other downstream 596506 37267247 ~ 37268199 (-) True XLOC_031247
TCONS_00060656 other downstream 2041157 35823418 ~ 35823548 (-) True XLOC_031231
TCONS_00060637 other downstream 2899918 34918991 ~ 34964787 (-) True XLOC_031220
TCONS_00060636 other downstream 3030612 34833978 ~ 34834093 (-) True XLOC_031221
TCONS_00060631 other downstream 3248739 34603814 ~ 34615966 (-) False XLOC_031219
TCONS_00060692 other upstream 9262 37890607 ~ 37894891 (-) False XLOC_031255
TCONS_00060699 other upstream 67509 37948854 ~ 37963763 (-) False XLOC_031257
TCONS_00060700 other upstream 71991 37953336 ~ 37959979 (-) True XLOC_031257
TCONS_00060704 other upstream 153992 38035337 ~ 38038217 (-) True XLOC_031259
TCONS_00060729 other upstream 609001 38490346 ~ 38506648 (-) True XLOC_031273

Expression Profile

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