RNA id: TCONS_00060688


Basic Information

Item Value
RNA id TCONS_00060688
length 457
RNA type mRNA
GC content 0.38
exon number 6
gene id XLOC_031254
representative False

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 37884022 ~ 37886077 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAACACTCAGAATCCTCTGTCACTTACAGTCTCACACAGATACAGGGGTGGAATTATCAGCTCTGACATATTTGAGATCCTGCAGCACATCAAAAAGATGGGAGTGGAAAGTCCTGAGCATTCAGATGCTGATTTCACCTATGATTATGAGTTAATCAGAAGAGGAGGACTGATCTTCGCagctgttttgttctgtttgggCATGGTTATCATATTCAGCAAAAAACTCAGATGTGGAAAGTCCTCTGCTACGCATGAAGATAATGGTGATCTTTGACCTCTTCTTCGTTAACCTTCACTGTATTGGGACACTTCAATATTTTCACCAAGGATGACAATATCTTTTTCACTTTTGGGTTTCAACTTACATCCATATATAGTCTGCTGAATACTGTAATTTTTTTAGTTCACAAGATCTGACACAATGTATGCAATCAcaataaaatgttcaaaatga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000132152

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00062049 lncRNA downstream 172172 37708702 ~ 37711850 (-) True XLOC_031251
TCONS_00061540 lncRNA downstream 280287 37592276 ~ 37603735 (-) True XLOC_031250
TCONS_00062048 lncRNA downstream 401002 37480447 ~ 37483020 (-) True XLOC_031249
TCONS_00062047 lncRNA downstream 401295 37480447 ~ 37482727 (-) False XLOC_031249
TCONS_00062046 lncRNA downstream 611711 37266944 ~ 37272311 (-) False XLOC_031247
TCONS_00061541 lncRNA upstream 4700 37890777 ~ 37894891 (-) False XLOC_031255
TCONS_00061542 lncRNA upstream 219375 38105452 ~ 38106799 (-) True XLOC_031262
TCONS_00062050 lncRNA upstream 363967 38250044 ~ 38255700 (-) False XLOC_031269
TCONS_00060719 lncRNA upstream 363967 38250044 ~ 38255744 (-) True XLOC_031269
TCONS_00062051 lncRNA upstream 728791 38614868 ~ 38633719 (-) True XLOC_031276
TCONS_00060685 mRNA downstream 2677 37864705 ~ 37881345 (-) False XLOC_031253
TCONS_00060686 mRNA downstream 8386 37867134 ~ 37875636 (-) False XLOC_031253
TCONS_00060687 mRNA downstream 12496 37869909 ~ 37871526 (-) True XLOC_031253
TCONS_00060684 mRNA downstream 63144 37817870 ~ 37820878 (-) True XLOC_031252
TCONS_00060683 mRNA downstream 542978 37316683 ~ 37341044 (-) True XLOC_031248
TCONS_00060690 mRNA upstream 2018 37888095 ~ 37900350 (-) False XLOC_031255
TCONS_00060691 mRNA upstream 2037 37888114 ~ 37900395 (-) False XLOC_031255
TCONS_00060693 mRNA upstream 7394 37893471 ~ 37900395 (-) True XLOC_031255
TCONS_00060694 mRNA upstream 32733 37918810 ~ 37935621 (-) False XLOC_031256
TCONS_00060695 mRNA upstream 32910 37918987 ~ 37933983 (-) False XLOC_031256
TCONS_00060682 other downstream 615823 37267247 ~ 37268199 (-) True XLOC_031247
TCONS_00060656 other downstream 2060474 35823418 ~ 35823548 (-) True XLOC_031231
TCONS_00060637 other downstream 2919235 34918991 ~ 34964787 (-) True XLOC_031220
TCONS_00060636 other downstream 3049929 34833978 ~ 34834093 (-) True XLOC_031221
TCONS_00060631 other downstream 3268056 34603814 ~ 34615966 (-) False XLOC_031219
TCONS_00060692 other upstream 4530 37890607 ~ 37894891 (-) False XLOC_031255
TCONS_00060699 other upstream 62777 37948854 ~ 37963763 (-) False XLOC_031257
TCONS_00060700 other upstream 67259 37953336 ~ 37959979 (-) True XLOC_031257
TCONS_00060704 other upstream 149260 38035337 ~ 38038217 (-) True XLOC_031259
TCONS_00060729 other upstream 604269 38490346 ~ 38506648 (-) True XLOC_031273

Expression Profile

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