RNA id: TCONS_00060704


Basic Information

Item Value
RNA id TCONS_00060704
length 958
RNA type processed_transcript
GC content 0.38
exon number 6
gene id XLOC_031259
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38035337 ~ 38038217 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTCAAAGAAGACAAAAGGACtccagtttgatcaggtgtggcTGAAACTCAACTGCGCAGAGCTCCGTCTCTTCAGGAACTGAGTCGCCTGTGGCCTAGATTATAAATTTGCTTTCACTTTCTTATTCTTTCAACCTCAACCCCTTCCTTGGTTAAGTGTATAGCGTTAAGGTGATCAACCTTTGTTCAGTAAGATTTCTTGGAACAACTGTAGGCTACTCAAGATATAAGCGAACGTTTTTTATCCCTTCACTTCAGAATATAATGTTGAGTAGAATTTTTTATACAATCGTAACACCTAAAAATGTGGAACAAACAGCTCAAGAATTCAAGAAAAATCTAAAGAAGAAGATAAAAAATGTTAGATTAAAAAACCCTGAGGAGGGACATCGCAAAAAGACAAGAGAAACGCCCAGTGATGTTTACCTGGCTTTCTGTCCAGTAGTTTCTGACACTAAAACTAACATTGATGCAACACTCAAGAATATTAAAGACGATAAGCCGACCATTTTAGTGGTGCTTCATCAAACACTTGAGAAGGAGGCTGTTGTGTCAAAAAGCAGTACATTTGTGGAAAGGGAGAATATGCTTGTTCTTGACTGTCTGTTCTACGAGGGTAAAGGCTTGCTTGCCTGTAAAAAAAATGAGGAGGCTTATAAAGAAGCTGCAAACCGTTCTTCAAAGAAAAACCAAAAAGTAGCTGATGACAATTCAAGCCGCAAGCAGGACACATCCTCCCCAGATGTCCGGTCTAGTAGAAATGATCATAATAGAGATGAACGCAAAAAACGTGATGCCTCCAAGAAAAAAACGAAAACTTGTGTTTTTCTCTGAACAGTGGAATTGATCACATCAGGCAAGCAACGCAAAATGCGACaaactttaaaattttaaattctgCACATCTTTATTGGAAAACAACATGGtggataaatttttttattgtttcatatgtttta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000134804

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00061541 lncRNA downstream 140446 37890777 ~ 37894891 (-) False XLOC_031255
TCONS_00062049 lncRNA downstream 323487 37708702 ~ 37711850 (-) True XLOC_031251
TCONS_00061540 lncRNA downstream 431602 37592276 ~ 37603735 (-) True XLOC_031250
TCONS_00062048 lncRNA downstream 552317 37480447 ~ 37483020 (-) True XLOC_031249
TCONS_00062047 lncRNA downstream 552610 37480447 ~ 37482727 (-) False XLOC_031249
TCONS_00061542 lncRNA upstream 67235 38105452 ~ 38106799 (-) True XLOC_031262
TCONS_00062050 lncRNA upstream 211827 38250044 ~ 38255700 (-) False XLOC_031269
TCONS_00060719 lncRNA upstream 211827 38250044 ~ 38255744 (-) True XLOC_031269
TCONS_00062051 lncRNA upstream 576651 38614868 ~ 38633719 (-) True XLOC_031276
TCONS_00062052 lncRNA upstream 582740 38620957 ~ 38622971 (-) True XLOC_031277
TCONS_00060702 mRNA downstream 37528 37982117 ~ 37997809 (-) False XLOC_031258
TCONS_00060703 mRNA downstream 37563 37991513 ~ 37997774 (-) True XLOC_031258
TCONS_00060701 mRNA downstream 46158 37981800 ~ 37989179 (-) False XLOC_031258
TCONS_00060698 mRNA downstream 75463 37948283 ~ 37959874 (-) False XLOC_031257
TCONS_00060694 mRNA downstream 99716 37918810 ~ 37935621 (-) False XLOC_031256
TCONS_00060705 mRNA upstream 22742 38060959 ~ 38064065 (-) False XLOC_031260
TCONS_00060706 mRNA upstream 22896 38061113 ~ 38063585 (-) True XLOC_031260
TCONS_00060707 mRNA upstream 50377 38088594 ~ 38094130 (-) True XLOC_031261
TCONS_00060708 mRNA upstream 66684 38104901 ~ 38107741 (-) False XLOC_031262
TCONS_00060709 mRNA upstream 72167 38110384 ~ 38121612 (-) False XLOC_031263
TCONS_00060699 other downstream 71574 37948854 ~ 37963763 (-) False XLOC_031257
TCONS_00060700 other downstream 75358 37953336 ~ 37959979 (-) True XLOC_031257
TCONS_00060692 other downstream 140446 37890607 ~ 37894891 (-) False XLOC_031255
TCONS_00060682 other downstream 767138 37267247 ~ 37268199 (-) True XLOC_031247
TCONS_00060656 other downstream 2211789 35823418 ~ 35823548 (-) True XLOC_031231
TCONS_00060729 other upstream 452129 38490346 ~ 38506648 (-) True XLOC_031273
TCONS_00060736 other upstream 659279 38697496 ~ 38705831 (-) True XLOC_031280
TCONS_00060742 other upstream 759987 38798204 ~ 38798318 (-) True XLOC_031285
TCONS_00060743 other upstream 775947 38814164 ~ 38824346 (-) True XLOC_031283
TCONS_00060744 other upstream 854405 38892622 ~ 38892759 (-) True XLOC_031286

Expression Profile

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