RNA id: TCONS_00060706


Basic Information

Item Value
RNA id TCONS_00060706
length 558
RNA type mRNA
GC content 0.38
exon number 5
gene id XLOC_031260
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38060959 ~ 38064065 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

atgttggaaaaaatttattacaaagtCATGACACCTAAAAATGTTGAACAAACTGCTCTAGAATTCGAGGAAAATctaaaaaagaatataaaatatgttaaattaaaaaatgtggagaggggaaaaaaaacaagagaaaagcCCAGTGATGTTCACCTGGCTTTCTGTCCGGTAGTTTCTCGCACTGGAACTGACATTGATGCGACACTCAAGAAAATTAAAGACGATACACCGACCATTTTAGTGGTGCTTCATCACACATTTGACACTGAGGTTGTTGTGTCAAATAGCAGTACATTTGTGGCAAGGGAGAATATGCTTGTTGTTGACTGTCTGTTCTACGAGGGTAAAGGATTGCTTGCCTGTAAAAAAAATAAGGAGGCTTATAAAGAAGCTGCAAAGTGGCTAAAAAACCGAAAGGAAGCTGTTGGCAATTCAAGCCGCAAGCAGGACACATCCTCCCCAGATGTCCGGTCTAGTAGAAATGATCATAATAGAGATGAACGCAAAAAACCTGATGCctccaagaaaaaaaagaaaacttgtgTTATTCTCTGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-192 No description available

Ensembl:

ensembl_id ENSDART00000164947

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00061541 lncRNA downstream 166222 37890777 ~ 37894891 (-) False XLOC_031255
TCONS_00062049 lncRNA downstream 349263 37708702 ~ 37711850 (-) True XLOC_031251
TCONS_00061540 lncRNA downstream 457378 37592276 ~ 37603735 (-) True XLOC_031250
TCONS_00062048 lncRNA downstream 578093 37480447 ~ 37483020 (-) True XLOC_031249
TCONS_00062047 lncRNA downstream 578386 37480447 ~ 37482727 (-) False XLOC_031249
TCONS_00061542 lncRNA upstream 41867 38105452 ~ 38106799 (-) True XLOC_031262
TCONS_00062050 lncRNA upstream 186459 38250044 ~ 38255700 (-) False XLOC_031269
TCONS_00060719 lncRNA upstream 186459 38250044 ~ 38255744 (-) True XLOC_031269
TCONS_00062051 lncRNA upstream 551283 38614868 ~ 38633719 (-) True XLOC_031276
TCONS_00062052 lncRNA upstream 557372 38620957 ~ 38622971 (-) True XLOC_031277
TCONS_00060702 mRNA downstream 63304 37982117 ~ 37997809 (-) False XLOC_031258
TCONS_00060703 mRNA downstream 63339 37991513 ~ 37997774 (-) True XLOC_031258
TCONS_00060701 mRNA downstream 71934 37981800 ~ 37989179 (-) False XLOC_031258
TCONS_00060698 mRNA downstream 101239 37948283 ~ 37959874 (-) False XLOC_031257
TCONS_00060696 mRNA downstream 125492 37933885 ~ 37935621 (-) False XLOC_031256
TCONS_00060707 mRNA upstream 25009 38088594 ~ 38094130 (-) True XLOC_031261
TCONS_00060708 mRNA upstream 41316 38104901 ~ 38107741 (-) False XLOC_031262
TCONS_00060709 mRNA upstream 46799 38110384 ~ 38121612 (-) False XLOC_031263
TCONS_00060711 mRNA upstream 46799 38110384 ~ 38122126 (-) False XLOC_031263
TCONS_00060710 mRNA upstream 46799 38110384 ~ 38122126 (-) True XLOC_031263
TCONS_00060704 other downstream 22896 38035337 ~ 38038217 (-) True XLOC_031259
TCONS_00060699 other downstream 97350 37948854 ~ 37963763 (-) False XLOC_031257
TCONS_00060700 other downstream 101134 37953336 ~ 37959979 (-) True XLOC_031257
TCONS_00060692 other downstream 166222 37890607 ~ 37894891 (-) False XLOC_031255
TCONS_00060682 other downstream 792914 37267247 ~ 37268199 (-) True XLOC_031247
TCONS_00060729 other upstream 426761 38490346 ~ 38506648 (-) True XLOC_031273
TCONS_00060736 other upstream 633911 38697496 ~ 38705831 (-) True XLOC_031280
TCONS_00060742 other upstream 734619 38798204 ~ 38798318 (-) True XLOC_031285
TCONS_00060743 other upstream 750579 38814164 ~ 38824346 (-) True XLOC_031283
TCONS_00060744 other upstream 829037 38892622 ~ 38892759 (-) True XLOC_031286

Expression Profile

//