RNA id: TCONS_00060765


Basic Information

Item Value
RNA id TCONS_00060765
length 231
RNA type mRNA
GC content 0.45
exon number 11
gene id XLOC_031302
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 40336828 ~ 40388543 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ccgcagctatctactcttttatttttgatcatacaGAACAACCAAGACTCTCCCAAACATGTGGAGGTGGTGGAAGtccgtcctttcttcacCCTTGAGCCTTTACAGATCAACAGCAGGTGGATAatggcAGGAGCTacaagACCCAGCATGGAAGACTTAGtaaaagaagtagagtcacaggttgtgagtttgttgGTTGAAGTAAAGATGCTCCTGCCAAAAAGGGTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000188251

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00062058 lncRNA downstream 105920 40228288 ~ 40230908 (-) True XLOC_031299
TCONS_00062057 lncRNA downstream 351331 39982688 ~ 39985497 (-) True XLOC_031295
TCONS_00062056 lncRNA downstream 455755 39880658 ~ 39881073 (-) True XLOC_031294
TCONS_00062055 lncRNA downstream 1291474 39042054 ~ 39045354 (-) True XLOC_031288
TCONS_00062054 lncRNA downstream 1544983 38790732 ~ 38791845 (-) True XLOC_031284
TCONS_00060768 lncRNA upstream 168689 40557232 ~ 40713887 (-) False XLOC_031304
TCONS_00062059 lncRNA upstream 196275 40584818 ~ 40594989 (-) False XLOC_031304
TCONS_00060770 lncRNA upstream 196275 40584818 ~ 40713800 (-) False XLOC_031304
TCONS_00060769 lncRNA upstream 196275 40584818 ~ 40713992 (-) False XLOC_031304
TCONS_00060771 lncRNA upstream 211656 40600199 ~ 40713887 (-) True XLOC_031304
TCONS_00060764 mRNA downstream 39825 40296551 ~ 40297003 (-) True XLOC_031301
TCONS_00060763 mRNA downstream 44529 40272848 ~ 40292299 (-) True XLOC_031300
TCONS_00060762 mRNA downstream 126381 40200818 ~ 40210447 (-) True XLOC_031298
TCONS_00060760 mRNA downstream 145879 40052930 ~ 40190949 (-) False XLOC_031297
TCONS_00060761 mRNA downstream 158736 40155172 ~ 40178092 (-) True XLOC_031297
TCONS_00060766 mRNA upstream 116367 40504910 ~ 40510399 (-) False XLOC_031303
TCONS_00060767 mRNA upstream 116376 40504919 ~ 40510397 (-) True XLOC_031303
TCONS_00060772 mRNA upstream 340070 40728613 ~ 40734045 (-) True XLOC_031305
TCONS_00060773 mRNA upstream 456425 40844968 ~ 40910749 (-) False XLOC_031307
TCONS_00060774 mRNA upstream 457599 40846142 ~ 40910880 (-) True XLOC_031307
TCONS_00060757 other downstream 349636 39981557 ~ 39987192 (-) False XLOC_031295
TCONS_00060755 other downstream 531222 39776671 ~ 39805606 (-) True XLOC_031293
TCONS_00060747 other downstream 1011944 39324768 ~ 39324884 (-) True XLOC_031290
TCONS_00060745 other downstream 1306903 39029811 ~ 39029925 (-) True XLOC_031287
TCONS_00060744 other downstream 1444069 38892622 ~ 38892759 (-) True XLOC_031286
TCONS_00060777 other upstream 615605 41004148 ~ 41004262 (-) True XLOC_031309
TCONS_00060783 other upstream 736212 41124755 ~ 41142766 (-) False XLOC_031311
TCONS_00060784 other upstream 737706 41126249 ~ 41128918 (-) False XLOC_031311
TCONS_00060785 other upstream 744802 41133345 ~ 41142768 (-) True XLOC_031311
TCONS_00060786 other upstream 794593 41183136 ~ 41183252 (-) True XLOC_031312