RNA id: TCONS_00061305


Basic Information

Item Value
RNA id TCONS_00061305
length 132
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_031655
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 68617958 ~ 68618089 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gCCAGTATTATTAGccgaacagaacaaaccatcattagacTCTCACATgttcgcccactgaagctaagcagggctgcgcccggtcagtacctggatgggagaccacatgggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120536

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00061296 lncRNA downstream 403624 68205952 ~ 68214334 (-) True XLOC_031650
TCONS_00062149 lncRNA downstream 645616 67964507 ~ 67972342 (-) True XLOC_031644
TCONS_00061286 lncRNA downstream 722145 67892185 ~ 67895813 (-) True XLOC_031642
TCONS_00061266 lncRNA downstream 1325285 67288411 ~ 67292673 (-) True XLOC_031631
TCONS_00061267 lncRNA downstream 1325292 67288411 ~ 67292666 (-) False XLOC_031631
TCONS_00062150 lncRNA upstream 4009 68622098 ~ 68668542 (-) True XLOC_031656
TCONS_00062151 lncRNA upstream 195834 68813923 ~ 68816110 (-) True XLOC_031659
TCONS_00062152 lncRNA upstream 272388 68890477 ~ 68892779 (-) False XLOC_031662
TCONS_00061312 lncRNA upstream 273426 68891515 ~ 68893011 (-) True XLOC_031662
TCONS_00061319 lncRNA upstream 349838 68967927 ~ 68971749 (-) True XLOC_031663
TCONS_00061303 mRNA downstream 121991 68449455 ~ 68495967 (-) True XLOC_031653
TCONS_00061301 mRNA downstream 122734 68408404 ~ 68495224 (-) False XLOC_031653
TCONS_00061302 mRNA downstream 160966 68449421 ~ 68456992 (-) False XLOC_031653
TCONS_00061300 mRNA downstream 160971 68408346 ~ 68456987 (-) False XLOC_031653
TCONS_00061299 mRNA downstream 284877 68326858 ~ 68333081 (-) True XLOC_031652
TCONS_00061307 mRNA upstream 147794 68765883 ~ 68779747 (-) False XLOC_031657
TCONS_00061306 mRNA upstream 147794 68765883 ~ 68779747 (-) False XLOC_031657
TCONS_00061308 mRNA upstream 148367 68766456 ~ 68782641 (-) True XLOC_031657
TCONS_00061309 mRNA upstream 170569 68788658 ~ 68795063 (-) True XLOC_031658
TCONS_00061310 mRNA upstream 198945 68817034 ~ 68826177 (-) True XLOC_031660
TCONS_00061295 other downstream 529611 68077134 ~ 68088347 (-) True XLOC_031649
TCONS_00061289 other downstream 624886 67982831 ~ 67993072 (-) True XLOC_031645
TCONS_00061285 other downstream 722103 67888846 ~ 67895855 (-) False XLOC_031642
TCONS_00061262 other downstream 1325307 67280218 ~ 67292651 (-) False XLOC_031631
TCONS_00061320 other upstream 403770 69021859 ~ 69021962 (-) True XLOC_031664
TCONS_00061350 other upstream 1038305 69656394 ~ 69656508 (-) True XLOC_031681
TCONS_00061376 other upstream 3471306 72089395 ~ 72089511 (-) True XLOC_031712
TCONS_00061384 other upstream 3648370 72266459 ~ 72286113 (-) True XLOC_031719