Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00008515 |
| length | 5286 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 8 |
| gene id | XLOC_003140 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 2308209 ~ 2320355 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0048468 | cell development | biological_process |
| GO:0000902 | cell morphogenesis | biological_process |
| GO:0000904 | cell morphogenesis involved in differentiation | biological_process |
| GO:0030182 | neuron differentiation | biological_process |
| GO:1990138 | neuron projection extension | biological_process |
| GO:0048812 | neuron projection morphogenesis | biological_process |
| GO:0120039 | plasma membrane bounded cell projection morphogenesis | biological_process |
| GO:0048858 | cell projection morphogenesis | biological_process |
| GO:0048588 | developmental cell growth | biological_process |
| GO:0032989 | cellular component morphogenesis | biological_process |
| GO:0032990 | cell part morphogenesis | biological_process |
| GO:0061564 | axon development | biological_process |
| GO:0048666 | neuron development | biological_process |
| GO:0048667 | cell morphogenesis involved in neuron differentiation | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0048675 | axon extension | biological_process |
| GO:0050803 | regulation of synapse structure or activity | biological_process |
| GO:0007409 | axonogenesis | biological_process |
| GO:0060560 | developmental growth involved in morphogenesis | biological_process |
| GO:0022008 | neurogenesis | biological_process |
| GO:0048699 | generation of neurons | biological_process |
| GO:0031175 | neuron projection development | biological_process |
| GO:0016049 | cell growth | biological_process |
| GO:0030672 | synaptic vesicle membrane | cellular_component |
| GO:0043025 | neuronal cell body | cellular_component |
| GO:0044456 | obsolete synapse part | cellular_component |
| GO:0045202 | synapse | cellular_component |
| GO:0099501 | exocytic vesicle membrane | cellular_component |
| GO:0099503 | secretory vesicle | cellular_component |
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0070382 | exocytic vesicle | cellular_component |
| GO:0044297 | cell body | cellular_component |
| GO:0008021 | synaptic vesicle | cellular_component |
| GO:0098793 | presynapse | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008379 | lncRNA | upstream | 102411 | 2198677 ~ 2205798 (+) | False | XLOC_003139 |
| TCONS_00006201 | lncRNA | upstream | 103665 | 2202987 ~ 2204544 (+) | False | XLOC_003139 |
| TCONS_00008512 | lncRNA | upstream | 107316 | 2198530 ~ 2200893 (+) | False | XLOC_003139 |
| TCONS_00006193 | lncRNA | upstream | 352056 | 1935893 ~ 1956153 (+) | True | XLOC_003132 |
| TCONS_00008378 | lncRNA | upstream | 355615 | 1951631 ~ 1952594 (+) | True | XLOC_003133 |
| TCONS_00006213 | lncRNA | downstream | 294715 | 2615070 ~ 2616023 (+) | True | XLOC_003149 |
| TCONS_00006224 | lncRNA | downstream | 390202 | 2710557 ~ 2730438 (+) | False | XLOC_003154 |
| TCONS_00006228 | lncRNA | downstream | 507198 | 2827553 ~ 2828675 (+) | True | XLOC_003156 |
| TCONS_00008381 | lncRNA | downstream | 609824 | 2930179 ~ 2930574 (+) | True | XLOC_003157 |
| TCONS_00008516 | lncRNA | downstream | 883132 | 3203487 ~ 3206698 (+) | True | XLOC_003160 |
| TCONS_00006200 | mRNA | upstream | 103455 | 2198831 ~ 2204754 (+) | False | XLOC_003139 |
| TCONS_00006202 | mRNA | upstream | 103455 | 2202987 ~ 2204754 (+) | True | XLOC_003139 |
| TCONS_00006198 | mRNA | upstream | 123035 | 2180072 ~ 2185174 (+) | False | XLOC_003137 |
| TCONS_00006197 | mRNA | upstream | 123035 | 2180072 ~ 2185174 (+) | True | XLOC_003137 |
| TCONS_00006196 | mRNA | upstream | 133176 | 2172335 ~ 2175033 (+) | True | XLOC_003136 |
| TCONS_00006203 | mRNA | downstream | 71114 | 2391469 ~ 2397974 (+) | True | XLOC_003141 |
| TCONS_00006204 | mRNA | downstream | 78488 | 2398843 ~ 2413107 (+) | True | XLOC_003142 |
| TCONS_00006205 | mRNA | downstream | 95709 | 2416064 ~ 2429303 (+) | True | XLOC_003143 |
| TCONS_00006206 | mRNA | downstream | 113907 | 2434262 ~ 2446346 (+) | True | XLOC_003144 |
| TCONS_00006207 | mRNA | downstream | 137909 | 2458264 ~ 2466879 (+) | True | XLOC_003145 |
| TCONS_00006199 | other | upstream | 117479 | 2190621 ~ 2190730 (+) | True | XLOC_003138 |
| TCONS_00006172 | other | upstream | 761978 | 1546117 ~ 1546231 (+) | True | XLOC_003126 |
| TCONS_00006169 | other | upstream | 778882 | 1522179 ~ 1529327 (+) | False | XLOC_003124 |
| TCONS_00006161 | other | upstream | 1577286 | 730807 ~ 730923 (+) | True | XLOC_003118 |
| TCONS_00006147 | other | upstream | 1936769 | 371322 ~ 371440 (+) | True | XLOC_003107 |
| TCONS_00006215 | other | downstream | 313436 | 2633791 ~ 2649394 (+) | False | XLOC_003150 |
| TCONS_00006226 | other | downstream | 424709 | 2745064 ~ 2747797 (+) | True | XLOC_003154 |
| TCONS_00006233 | other | downstream | 856331 | 3176686 ~ 3176770 (+) | True | XLOC_003159 |
| TCONS_00006246 | other | downstream | 1178835 | 3499190 ~ 3514108 (+) | False | XLOC_003165 |
| TCONS_00006254 | other | downstream | 1645372 | 3965727 ~ 3968309 (+) | True | XLOC_003171 |
