Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00064799 |
| length | 2767 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | XLOC_031792 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 4001317 ~ 4004456 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0001732 | formation of cytoplasmic translation initiation complex | biological_process |
| GO:0071826 | ribonucleoprotein complex subunit organization | biological_process |
| GO:0022613 | ribonucleoprotein complex biogenesis | biological_process |
| GO:0022618 | ribonucleoprotein complex assembly | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0006413 | translational initiation | biological_process |
| GO:0002181 | cytoplasmic translation | biological_process |
| GO:0002183 | cytoplasmic translational initiation | biological_process |
| GO:0071541 | eukaryotic translation initiation factor 3 complex, eIF3m | cellular_component |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0005852 | eukaryotic translation initiation factor 3 complex | cellular_component |
| GO:0005854 | nascent polypeptide-associated complex | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0033290 | eukaryotic 48S preinitiation complex | cellular_component |
| GO:0016282 | eukaryotic 43S preinitiation complex | cellular_component |
| GO:0070993 | translation preinitiation complex | cellular_component |
| GO:0008135 | translation factor activity, RNA binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| GO:0003743 | translation initiation factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00064798 | lncRNA | upstream | 122475 | 3877672 ~ 3879215 (+) | True | XLOC_031790 |
| TCONS_00064797 | lncRNA | upstream | 151448 | 3827777 ~ 3850242 (+) | False | XLOC_031788 |
| TCONS_00062270 | lncRNA | upstream | 175565 | 3816049 ~ 3826125 (+) | True | XLOC_031787 |
| TCONS_00064599 | lncRNA | upstream | 420399 | 3575051 ~ 3581291 (+) | True | XLOC_031780 |
| TCONS_00064796 | lncRNA | upstream | 578957 | 3419776 ~ 3422733 (+) | True | XLOC_031776 |
| TCONS_00064800 | lncRNA | downstream | 513702 | 4518158 ~ 4520247 (+) | True | XLOC_031798 |
| TCONS_00064600 | lncRNA | downstream | 1193813 | 5198269 ~ 5399444 (+) | True | XLOC_031802 |
| TCONS_00064801 | lncRNA | downstream | 1934009 | 5938465 ~ 5981359 (+) | False | XLOC_031804 |
| TCONS_00064802 | lncRNA | downstream | 1934009 | 5938465 ~ 5981858 (+) | False | XLOC_031804 |
| TCONS_00062298 | lncRNA | downstream | 1934021 | 5938477 ~ 5961955 (+) | True | XLOC_031804 |
| TCONS_00062278 | mRNA | upstream | 45110 | 3934738 ~ 3956580 (+) | True | XLOC_031791 |
| TCONS_00062277 | mRNA | upstream | 126575 | 3864040 ~ 3875115 (+) | True | XLOC_031789 |
| TCONS_00062275 | mRNA | upstream | 138238 | 3828560 ~ 3863452 (+) | False | XLOC_031788 |
| TCONS_00062274 | mRNA | upstream | 138238 | 3828560 ~ 3863452 (+) | False | XLOC_031788 |
| TCONS_00062272 | mRNA | upstream | 139577 | 3827751 ~ 3862113 (+) | False | XLOC_031788 |
| TCONS_00062280 | mRNA | downstream | 29376 | 4033832 ~ 4146073 (+) | False | XLOC_031793 |
| TCONS_00062281 | mRNA | downstream | 80283 | 4084739 ~ 4146073 (+) | True | XLOC_031793 |
| TCONS_00062284 | mRNA | downstream | 156123 | 4160579 ~ 4176841 (+) | False | XLOC_031794 |
| TCONS_00062283 | mRNA | downstream | 156123 | 4160579 ~ 4176841 (+) | False | XLOC_031794 |
| TCONS_00062282 | mRNA | downstream | 156123 | 4160579 ~ 4176841 (+) | True | XLOC_031794 |
| TCONS_00062276 | other | upstream | 151448 | 3834442 ~ 3850242 (+) | True | XLOC_031788 |
| TCONS_00062273 | other | upstream | 163462 | 3827777 ~ 3838228 (+) | False | XLOC_031788 |
| TCONS_00062248 | other | upstream | 752220 | 3218363 ~ 3249470 (+) | True | XLOC_031772 |
| TCONS_00062246 | other | upstream | 835968 | 3165608 ~ 3165722 (+) | True | XLOC_031773 |
| TCONS_00062191 | other | upstream | 3896968 | 103361 ~ 104722 (+) | False | XLOC_031731 |
| TCONS_00062297 | other | downstream | 1679725 | 5684181 ~ 5684295 (+) | True | XLOC_031803 |
| TCONS_00062300 | other | downstream | 2211338 | 6215794 ~ 6215910 (+) | True | XLOC_031807 |
| TCONS_00062305 | other | downstream | 2267411 | 6271867 ~ 6273477 (+) | True | XLOC_031808 |
| TCONS_00062321 | other | downstream | 2827590 | 6832046 ~ 6832621 (+) | True | XLOC_031815 |
| TCONS_00062324 | other | downstream | 2875471 | 6879927 ~ 6880049 (+) | True | XLOC_031817 |
