Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062357 |
| length | 1054 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 1 |
| gene id | XLOC_031835 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 8153813 ~ 8154866 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0007623 | circadian rhythm | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-081022-142 | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in circadian rhythm and regulation of transcription, DNA-templated. Predicted to be active in nucleus. |
| ensembl_id | ENSDART00000192436 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00062354 | lncRNA | upstream | 60014 | 8090423 ~ 8093799 (+) | False | XLOC_031833 |
| TCONS_00062351 | lncRNA | upstream | 501401 | 7650727 ~ 7652412 (+) | True | XLOC_031831 |
| TCONS_00062339 | lncRNA | upstream | 718113 | 7429311 ~ 7435700 (+) | True | XLOC_031826 |
| TCONS_00064806 | lncRNA | upstream | 945184 | 7207593 ~ 7208629 (+) | True | XLOC_031820 |
| TCONS_00062325 | lncRNA | upstream | 1253130 | 6894228 ~ 6900683 (+) | True | XLOC_031816 |
| TCONS_00064807 | lncRNA | downstream | 109898 | 8264764 ~ 8271403 (+) | True | XLOC_031837 |
| TCONS_00062364 | lncRNA | downstream | 184405 | 8339271 ~ 8346941 (+) | True | XLOC_031839 |
| TCONS_00064808 | lncRNA | downstream | 295445 | 8450311 ~ 8453642 (+) | True | XLOC_031840 |
| TCONS_00062372 | lncRNA | downstream | 550283 | 8705149 ~ 8871084 (+) | False | XLOC_031845 |
| TCONS_00064809 | lncRNA | downstream | 553922 | 8708788 ~ 8741728 (+) | False | XLOC_031845 |
| TCONS_00062356 | mRNA | upstream | 12855 | 8129543 ~ 8140958 (+) | True | XLOC_031834 |
| TCONS_00062353 | mRNA | upstream | 59820 | 8079974 ~ 8093993 (+) | False | XLOC_031833 |
| TCONS_00062352 | mRNA | upstream | 78964 | 7977611 ~ 8074849 (+) | True | XLOC_031832 |
| TCONS_00062349 | mRNA | upstream | 495528 | 7553085 ~ 7658285 (+) | False | XLOC_031831 |
| TCONS_00062358 | mRNA | downstream | 17361 | 8172227 ~ 8180042 (+) | False | XLOC_031836 |
| TCONS_00062359 | mRNA | downstream | 21620 | 8176486 ~ 8179934 (+) | True | XLOC_031836 |
| TCONS_00062360 | mRNA | downstream | 159585 | 8314451 ~ 8328453 (+) | False | XLOC_031838 |
| TCONS_00062361 | mRNA | downstream | 159650 | 8314516 ~ 8323750 (+) | False | XLOC_031838 |
| TCONS_00062363 | mRNA | downstream | 160184 | 8315050 ~ 8330577 (+) | True | XLOC_031838 |
| TCONS_00062355 | other | upstream | 60014 | 8090577 ~ 8093799 (+) | True | XLOC_031833 |
| TCONS_00062345 | other | upstream | 648797 | 7500128 ~ 7505016 (+) | False | XLOC_031829 |
| TCONS_00062343 | other | upstream | 681316 | 7466273 ~ 7472497 (+) | False | XLOC_031829 |
| TCONS_00062341 | other | upstream | 699982 | 7453355 ~ 7453831 (+) | True | XLOC_031828 |
| TCONS_00062324 | other | upstream | 1273764 | 6879927 ~ 6880049 (+) | True | XLOC_031817 |
| TCONS_00062362 | other | downstream | 159657 | 8314523 ~ 8321969 (+) | False | XLOC_031838 |
| TCONS_00062371 | other | downstream | 536542 | 8691408 ~ 8691993 (+) | True | XLOC_031844 |
| TCONS_00062373 | other | downstream | 616610 | 8771476 ~ 8771596 (+) | True | XLOC_031846 |
| TCONS_00062400 | other | downstream | 1722847 | 9877713 ~ 9878219 (+) | False | XLOC_031862 |
| TCONS_00062404 | other | downstream | 1746258 | 9901124 ~ 9908762 (+) | False | XLOC_031864 |
