Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062369 |
| length | 1596 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 11 |
| gene id | XLOC_031842 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 8622228 ~ 8650321 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-120215-12 | Predicted to be involved in signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 98 and ectodermal dysplasia 14. Orthologous to human TSPEAR (thrombospondin type laminin G domain and EAR repeats). |
| ensembl_id | ENSDART00000193976 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00064808 | lncRNA | upstream | 176713 | 8450311 ~ 8453642 (+) | True | XLOC_031840 |
| TCONS_00062364 | lncRNA | upstream | 283414 | 8339271 ~ 8346941 (+) | True | XLOC_031839 |
| TCONS_00064807 | lncRNA | upstream | 358952 | 8264764 ~ 8271403 (+) | True | XLOC_031837 |
| TCONS_00062354 | lncRNA | upstream | 536556 | 8090423 ~ 8093799 (+) | False | XLOC_031833 |
| TCONS_00062351 | lncRNA | upstream | 977943 | 7650727 ~ 7652412 (+) | True | XLOC_031831 |
| TCONS_00062372 | lncRNA | downstream | 54828 | 8705149 ~ 8871084 (+) | False | XLOC_031845 |
| TCONS_00064809 | lncRNA | downstream | 58467 | 8708788 ~ 8741728 (+) | False | XLOC_031845 |
| TCONS_00064810 | lncRNA | downstream | 60021 | 8710342 ~ 8997996 (+) | False | XLOC_031845 |
| TCONS_00064601 | lncRNA | downstream | 259385 | 8909706 ~ 8997994 (+) | True | XLOC_031845 |
| TCONS_00062375 | lncRNA | downstream | 465889 | 9116210 ~ 9122999 (+) | True | XLOC_031847 |
| TCONS_00062365 | mRNA | upstream | 20960 | 8598428 ~ 8609395 (+) | True | XLOC_031841 |
| TCONS_00062363 | mRNA | upstream | 299778 | 8315050 ~ 8330577 (+) | True | XLOC_031838 |
| TCONS_00062360 | mRNA | upstream | 301902 | 8314451 ~ 8328453 (+) | False | XLOC_031838 |
| TCONS_00062361 | mRNA | upstream | 306605 | 8314516 ~ 8323750 (+) | False | XLOC_031838 |
| TCONS_00062359 | mRNA | upstream | 450421 | 8176486 ~ 8179934 (+) | True | XLOC_031836 |
| TCONS_00062370 | mRNA | downstream | 1989 | 8652310 ~ 8684070 (+) | True | XLOC_031843 |
| TCONS_00062374 | mRNA | downstream | 456742 | 9107063 ~ 9130843 (+) | False | XLOC_031847 |
| TCONS_00062376 | mRNA | downstream | 480668 | 9130989 ~ 9139986 (+) | True | XLOC_031848 |
| TCONS_00062377 | mRNA | downstream | 492410 | 9142731 ~ 9150376 (+) | False | XLOC_031849 |
| TCONS_00062379 | mRNA | downstream | 504950 | 9155271 ~ 9161393 (+) | True | XLOC_031850 |
| TCONS_00062362 | other | upstream | 308386 | 8314523 ~ 8321969 (+) | False | XLOC_031838 |
| TCONS_00062355 | other | upstream | 536556 | 8090577 ~ 8093799 (+) | True | XLOC_031833 |
| TCONS_00062345 | other | upstream | 1125339 | 7500128 ~ 7505016 (+) | False | XLOC_031829 |
| TCONS_00062343 | other | upstream | 1157858 | 7466273 ~ 7472497 (+) | False | XLOC_031829 |
| TCONS_00062341 | other | upstream | 1176524 | 7453355 ~ 7453831 (+) | True | XLOC_031828 |
| TCONS_00062371 | other | downstream | 41087 | 8691408 ~ 8691993 (+) | True | XLOC_031844 |
| TCONS_00062373 | other | downstream | 121155 | 8771476 ~ 8771596 (+) | True | XLOC_031846 |
| TCONS_00062400 | other | downstream | 1227392 | 9877713 ~ 9878219 (+) | False | XLOC_031862 |
| TCONS_00062404 | other | downstream | 1250803 | 9901124 ~ 9908762 (+) | False | XLOC_031864 |
| TCONS_00062432 | other | downstream | 2216703 | 10867024 ~ 10867141 (+) | True | XLOC_031883 |
