RNA id: TCONS_00062377


Basic Information

Item Value
RNA id TCONS_00062377
length 1497
RNA type mRNA
GC content 0.44
exon number 7
gene id XLOC_031849
representative False

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 9142731 ~ 9150376 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GACTGTTACACATAAAAAGGACACAAACGTTTGCATTCAGTCAATAAGCAGACGCTTttctccaaagcgacttacaattgaggagcaATTCAACAAGAACAGCTACAAGGAGGATCATTAAACATCTGAAAGAACAGAAGAATGGCTGAAGCGGAAGGTCTTGCTGACTGGATGTCCAAATTGAATGAGACATTCACAACAGTCCCCTTGAGCCATATTGCAATTCCAGGCAGCCACGATGCTATGGCCTACAGCTTAGACATGGACTCTCCAGTCCTGGAACCTGACAGTCTCAAACCTATGGACAACATGTTCAGTGCATTCTTAAGGCCCATTGTCAAGAAATGGGGCACCGCTCAGGATAAAACCATCTCTGAGCAGCTTGATGCTGGTACGCGCTATTTTGATCTGCGGGTTGCTGGAAAGCCTGAATCCAGCGATTTCTTCTTCTATCATGGATTGTACACAACGATGACTGTGAAGGAGGCAATGACTGAACTGAAGACATGGTTAGGACAGCACTCTAAGGAGGTCGTCATCCTTGCTTTCTCACATTTCAAGGAAATGTCAGCCGATCAACACACAGACCTGACCAACTTCCTCAAAGAGCACTTCAAAACCAAACTCTGTCCTAAGGCTAAAATGCCTTCACTGAAGGACTGCTGGGAAAGTAGCTATCAGGTTATCCTCTCTTATGATGACAGAAATATTGAGGATCCTGTTTTGTGGCCTCGAATCGGGTACTGGTGGGCTGATAATTCAGACCCCAATGAGGTCATTTCATTCCTCGATAACAAGAAACAGACAGGCAGACCAGAGGGATTGTTTGTTGCTGGTCTCAACCTGACTTTTGATGCGAATGACATGCTCCAGTACCTCACAACATCATTAAAGGAGAAGACCATGACGGCTTACCCTCTGTTGCTGGAATGGGTGAAGGAGCAACACCCAGGCTCGGGCACACAAAGCATCAACATCATCGCTGGAGATTTTGTTGGCGTGAACAGCTTTGCTCACGATGTCATTCAGCTCAACAATGCCAAAAACTAGTTCTTGAAgatctagtgcaggggtcaccaatctcggtcctggagggctggtgtccctgcagggtttagctccaacttgcctcaacacacctgcctggatgattcaagtatacctagtaagaccttgattagcttgttcaggtgtgtttgattagggttggagctaaaatccagtttggtgaccactgatctagtgGTAGATACTGTTACATTTcgtgaatgaaagaaagaatataTATTGTAGTCTGTTAAATGGGGGTGCAATAAAGTGCTGCAGAGATGACATGTTTTGTTGGCCAAAATATTGAAATGtcagcatttttgttttgatgtcaGTGTATTTTTTGAATGCTTTTTGGGGCAAGGCCTGAGATAAGGTCTCTAATGACAAGTGCAAGATATAGTCAtgctttattaataaaataaataaaaaaataccatcAGCAAA

Function

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0008081 phosphoric diester hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1355 Predicted to enable phosphoric diester hydrolase activity. Predicted to act upstream of or within lipid metabolic process. Orthologous to human PLCXD1 (phosphatidylinositol specific phospholipase C X domain containing 1).

Ensembl:

ensembl_id ENSDART00000151615

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00062375 lncRNA upstream 19732 9116210 ~ 9122999 (+) True XLOC_031847
TCONS_00064810 lncRNA upstream 144735 8710342 ~ 8997996 (+) False XLOC_031845
TCONS_00064601 lncRNA upstream 144737 8909706 ~ 8997994 (+) True XLOC_031845
TCONS_00062372 lncRNA upstream 271647 8705149 ~ 8871084 (+) False XLOC_031845
TCONS_00062378 lncRNA downstream 4876 9155252 ~ 9156475 (+) False XLOC_031850
TCONS_00062380 lncRNA downstream 12631 9163007 ~ 9164205 (+) False XLOC_031851
TCONS_00062382 lncRNA downstream 13870 9164246 ~ 9165146 (+) True XLOC_031851
TCONS_00064812 lncRNA downstream 247698 9398074 ~ 9433591 (+) False XLOC_031856
TCONS_00064813 lncRNA downstream 387294 9537670 ~ 9539292 (+) True XLOC_031857
TCONS_00062376 mRNA upstream 2745 9130989 ~ 9139986 (+) True XLOC_031848
TCONS_00062374 mRNA upstream 11888 9107063 ~ 9130843 (+) False XLOC_031847
TCONS_00062370 mRNA upstream 458661 8652310 ~ 8684070 (+) True XLOC_031843
TCONS_00062367 mRNA upstream 492410 8626427 ~ 8650321 (+) False XLOC_031842
TCONS_00062379 mRNA downstream 4895 9155271 ~ 9161393 (+) True XLOC_031850
TCONS_00062381 mRNA downstream 12650 9163026 ~ 9173106 (+) False XLOC_031851
TCONS_00062383 mRNA downstream 25510 9175886 ~ 9187959 (+) True XLOC_031852
TCONS_00062384 mRNA downstream 41605 9191981 ~ 9201566 (+) True XLOC_031853
TCONS_00062385 mRNA downstream 53723 9204099 ~ 9218386 (+) False XLOC_031854
TCONS_00062373 other upstream 371135 8771476 ~ 8771596 (+) True XLOC_031846
TCONS_00062371 other upstream 450738 8691408 ~ 8691993 (+) True XLOC_031844
TCONS_00062362 other upstream 820762 8314523 ~ 8321969 (+) False XLOC_031838
TCONS_00062355 other upstream 1048932 8090577 ~ 8093799 (+) True XLOC_031833
TCONS_00062345 other upstream 1637715 7500128 ~ 7505016 (+) False XLOC_031829
TCONS_00062400 other downstream 727337 9877713 ~ 9878219 (+) False XLOC_031862
TCONS_00062404 other downstream 750748 9901124 ~ 9908762 (+) False XLOC_031864
TCONS_00062432 other downstream 1716648 10867024 ~ 10867141 (+) True XLOC_031883
TCONS_00062436 other downstream 1868040 11018416 ~ 11018532 (+) True XLOC_031889
TCONS_00062446 other downstream 2247265 11397641 ~ 11408137 (+) False XLOC_031893

Expression Profile

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