Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062379 |
| length | 2895 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 7 |
| gene id | XLOC_031850 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 9155252 ~ 9161393 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0050877 | nervous system process | biological_process |
| GO:0006629 | lipid metabolic process | biological_process |
| GO:0043010 | camera-type eye development | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0048880 | sensory system development | biological_process |
| GO:0003008 | system process | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0001654 | eye development | biological_process |
| GO:0007423 | sensory organ development | biological_process |
| GO:0150063 | visual system development | biological_process |
| GO:0043005 | neuron projection | cellular_component |
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| GO:0008081 | phosphoric diester hydrolase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1355 | Predicted to enable phosphoric diester hydrolase activity. Predicted to act upstream of or within lipid metabolic process. Orthologous to human PLCXD1 (phosphatidylinositol specific phospholipase C X domain containing 1). |
| ensembl_id | ENSDART00000168727 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00064811 | lncRNA | upstream | 8788 | 9142884 ~ 9146483 (+) | True | XLOC_031849 |
| TCONS_00062375 | lncRNA | upstream | 32272 | 9116210 ~ 9122999 (+) | True | XLOC_031847 |
| TCONS_00064810 | lncRNA | upstream | 157275 | 8710342 ~ 8997996 (+) | False | XLOC_031845 |
| TCONS_00064601 | lncRNA | upstream | 157277 | 8909706 ~ 8997994 (+) | True | XLOC_031845 |
| TCONS_00062372 | lncRNA | upstream | 284187 | 8705149 ~ 8871084 (+) | False | XLOC_031845 |
| TCONS_00062380 | lncRNA | downstream | 1614 | 9163007 ~ 9164205 (+) | False | XLOC_031851 |
| TCONS_00062382 | lncRNA | downstream | 2853 | 9164246 ~ 9165146 (+) | True | XLOC_031851 |
| TCONS_00064812 | lncRNA | downstream | 236681 | 9398074 ~ 9433591 (+) | False | XLOC_031856 |
| TCONS_00064813 | lncRNA | downstream | 376277 | 9537670 ~ 9539292 (+) | True | XLOC_031857 |
| TCONS_00064602 | lncRNA | downstream | 489858 | 9651251 ~ 9666598 (+) | True | XLOC_031858 |
| TCONS_00062377 | mRNA | upstream | 4895 | 9142731 ~ 9150376 (+) | False | XLOC_031849 |
| TCONS_00062376 | mRNA | upstream | 15285 | 9130989 ~ 9139986 (+) | True | XLOC_031848 |
| TCONS_00062374 | mRNA | upstream | 24428 | 9107063 ~ 9130843 (+) | False | XLOC_031847 |
| TCONS_00062370 | mRNA | upstream | 471201 | 8652310 ~ 8684070 (+) | True | XLOC_031843 |
| TCONS_00062369 | mRNA | upstream | 504950 | 8630355 ~ 8650321 (+) | False | XLOC_031842 |
| TCONS_00062381 | mRNA | downstream | 1633 | 9163026 ~ 9173106 (+) | False | XLOC_031851 |
| TCONS_00062383 | mRNA | downstream | 14493 | 9175886 ~ 9187959 (+) | True | XLOC_031852 |
| TCONS_00062384 | mRNA | downstream | 30588 | 9191981 ~ 9201566 (+) | True | XLOC_031853 |
| TCONS_00062385 | mRNA | downstream | 42706 | 9204099 ~ 9218386 (+) | False | XLOC_031854 |
| TCONS_00062386 | mRNA | downstream | 42706 | 9204099 ~ 9220775 (+) | True | XLOC_031854 |
| TCONS_00062373 | other | upstream | 383675 | 8771476 ~ 8771596 (+) | True | XLOC_031846 |
| TCONS_00062371 | other | upstream | 463278 | 8691408 ~ 8691993 (+) | True | XLOC_031844 |
| TCONS_00062362 | other | upstream | 833302 | 8314523 ~ 8321969 (+) | False | XLOC_031838 |
| TCONS_00062355 | other | upstream | 1061472 | 8090577 ~ 8093799 (+) | True | XLOC_031833 |
| TCONS_00062345 | other | upstream | 1650255 | 7500128 ~ 7505016 (+) | False | XLOC_031829 |
| TCONS_00062400 | other | downstream | 716320 | 9877713 ~ 9878219 (+) | False | XLOC_031862 |
| TCONS_00062404 | other | downstream | 739731 | 9901124 ~ 9908762 (+) | False | XLOC_031864 |
| TCONS_00062432 | other | downstream | 1705631 | 10867024 ~ 10867141 (+) | True | XLOC_031883 |
| TCONS_00062436 | other | downstream | 1857023 | 11018416 ~ 11018532 (+) | True | XLOC_031889 |
| TCONS_00062446 | other | downstream | 2236248 | 11397641 ~ 11408137 (+) | False | XLOC_031893 |
