Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062896 |
| length | 1200 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 2 |
| gene id | XLOC_032191 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 38845676 ~ 38861349 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0051321 | meiotic cell cycle | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041212-52 | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in meiotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK35 (serine/threonine kinase 35). |
| ensembl_id | ENSDART00000184907 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00062888 | lncRNA | upstream | 255676 | 38518219 ~ 38590172 (+) | True | XLOC_032188 |
| TCONS_00064905 | lncRNA | upstream | 485405 | 38358681 ~ 38360443 (+) | True | XLOC_032185 |
| TCONS_00062878 | lncRNA | upstream | 1119923 | 37725309 ~ 37725925 (+) | True | XLOC_032181 |
| TCONS_00064904 | lncRNA | upstream | 1369747 | 37470116 ~ 37476101 (+) | False | XLOC_032178 |
| TCONS_00062900 | lncRNA | downstream | 29985 | 38880442 ~ 38885538 (+) | True | XLOC_032192 |
| TCONS_00064906 | lncRNA | downstream | 103024 | 38953481 ~ 38955126 (+) | True | XLOC_032194 |
| TCONS_00062917 | lncRNA | downstream | 519878 | 39370335 ~ 39378734 (+) | False | XLOC_032204 |
| TCONS_00064909 | lncRNA | downstream | 682021 | 39532478 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00064908 | lncRNA | downstream | 682021 | 39532478 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00062891 | mRNA | upstream | 55784 | 38773376 ~ 38790064 (+) | False | XLOC_032190 |
| TCONS_00062892 | mRNA | upstream | 55793 | 38773417 ~ 38790055 (+) | False | XLOC_032190 |
| TCONS_00062890 | mRNA | upstream | 115318 | 38626926 ~ 38730530 (+) | True | XLOC_032189 |
| TCONS_00062889 | mRNA | upstream | 119446 | 38626684 ~ 38726402 (+) | False | XLOC_032189 |
| TCONS_00062887 | mRNA | upstream | 332270 | 38427570 ~ 38513578 (+) | True | XLOC_032187 |
| TCONS_00062897 | mRNA | downstream | 29504 | 38879961 ~ 38894366 (+) | False | XLOC_032192 |
| TCONS_00062898 | mRNA | downstream | 29709 | 38880166 ~ 38893499 (+) | False | XLOC_032192 |
| TCONS_00062899 | mRNA | downstream | 29718 | 38880175 ~ 38887112 (+) | False | XLOC_032192 |
| TCONS_00062901 | mRNA | downstream | 45701 | 38896158 ~ 38902498 (+) | False | XLOC_032193 |
| TCONS_00062902 | mRNA | downstream | 45783 | 38896240 ~ 38899167 (+) | True | XLOC_032193 |
| TCONS_00062893 | other | upstream | 63690 | 38773418 ~ 38782158 (+) | True | XLOC_032190 |
| TCONS_00062884 | other | upstream | 468637 | 38377091 ~ 38377211 (+) | True | XLOC_032186 |
| TCONS_00062883 | other | upstream | 758237 | 38087495 ~ 38087611 (+) | True | XLOC_032184 |
| TCONS_00062877 | other | upstream | 1128738 | 37715272 ~ 37717110 (+) | False | XLOC_032181 |
| TCONS_00062866 | other | upstream | 1510885 | 37334559 ~ 37334963 (+) | True | XLOC_032176 |
| TCONS_00062919 | other | downstream | 520163 | 39370620 ~ 39371875 (+) | True | XLOC_032204 |
| TCONS_00062936 | other | downstream | 1193158 | 40043615 ~ 40049445 (+) | True | XLOC_032217 |
| TCONS_00062945 | other | downstream | 1695408 | 40545865 ~ 40546975 (+) | False | XLOC_032225 |
| TCONS_00062987 | other | downstream | 2344230 | 41194687 ~ 41194801 (+) | True | XLOC_032251 |
| TCONS_00062995 | other | downstream | 2604334 | 41454791 ~ 41454873 (+) | True | XLOC_032256 |
