Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062901 |
| length | 1516 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 4 |
| gene id | XLOC_032193 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 38896158 ~ 38902498 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048821 | erythrocyte development | biological_process |
| GO:0015886 | heme transport | biological_process |
| GO:0005764 | lysosome | cellular_component |
| GO:0005765 | lysosomal membrane | cellular_component |
| GO:0005768 | endosome | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0010008 | endosome membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015232 | heme transmembrane transporter activity | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-8226 | Enables heme transmembrane transporter activity. Acts upstream of or within erythrocyte development. Predicted to be located in endosome membrane and lysosome. Predicted to be integral component of membrane. Predicted to be active in lysosomal membrane and plasma membrane. Is expressed in several structures, including blood; central nervous system; heart; liver; and pleuroperitoneal region. Orthologous to human SLC48A1 (solute carrier family 48 member 1). |
| ensembl_id | ENSDART00000029930 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00062900 | lncRNA | upstream | 10620 | 38880442 ~ 38885538 (+) | True | XLOC_032192 |
| TCONS_00062888 | lncRNA | upstream | 305986 | 38518219 ~ 38590172 (+) | True | XLOC_032188 |
| TCONS_00064905 | lncRNA | upstream | 535715 | 38358681 ~ 38360443 (+) | True | XLOC_032185 |
| TCONS_00062878 | lncRNA | upstream | 1170233 | 37725309 ~ 37725925 (+) | True | XLOC_032181 |
| TCONS_00064904 | lncRNA | upstream | 1420057 | 37470116 ~ 37476101 (+) | False | XLOC_032178 |
| TCONS_00064906 | lncRNA | downstream | 50983 | 38953481 ~ 38955126 (+) | True | XLOC_032194 |
| TCONS_00062917 | lncRNA | downstream | 467837 | 39370335 ~ 39378734 (+) | False | XLOC_032204 |
| TCONS_00064909 | lncRNA | downstream | 629980 | 39532478 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00064908 | lncRNA | downstream | 629980 | 39532478 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00064907 | lncRNA | downstream | 629980 | 39532478 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00062897 | mRNA | upstream | 1792 | 38879961 ~ 38894366 (+) | False | XLOC_032192 |
| TCONS_00062898 | mRNA | upstream | 2659 | 38880166 ~ 38893499 (+) | False | XLOC_032192 |
| TCONS_00062899 | mRNA | upstream | 9046 | 38880175 ~ 38887112 (+) | False | XLOC_032192 |
| TCONS_00062895 | mRNA | upstream | 34809 | 38845697 ~ 38861349 (+) | False | XLOC_032191 |
| TCONS_00062896 | mRNA | upstream | 45701 | 38845848 ~ 38850457 (+) | True | XLOC_032191 |
| TCONS_00062903 | mRNA | downstream | 183471 | 39085969 ~ 39091330 (+) | True | XLOC_032195 |
| TCONS_00062904 | mRNA | downstream | 195899 | 39098397 ~ 39105480 (+) | False | XLOC_032196 |
| TCONS_00062905 | mRNA | downstream | 195975 | 39098473 ~ 39104152 (+) | True | XLOC_032196 |
| TCONS_00062906 | mRNA | downstream | 206360 | 39108858 ~ 39112234 (+) | False | XLOC_032197 |
| TCONS_00062907 | mRNA | downstream | 206450 | 39108948 ~ 39111923 (+) | True | XLOC_032197 |
| TCONS_00062894 | other | upstream | 37856 | 38845676 ~ 38858302 (+) | False | XLOC_032191 |
| TCONS_00062893 | other | upstream | 114000 | 38773418 ~ 38782158 (+) | True | XLOC_032190 |
| TCONS_00062884 | other | upstream | 518947 | 38377091 ~ 38377211 (+) | True | XLOC_032186 |
| TCONS_00062883 | other | upstream | 808547 | 38087495 ~ 38087611 (+) | True | XLOC_032184 |
| TCONS_00062877 | other | upstream | 1179048 | 37715272 ~ 37717110 (+) | False | XLOC_032181 |
| TCONS_00062919 | other | downstream | 468122 | 39370620 ~ 39371875 (+) | True | XLOC_032204 |
| TCONS_00062936 | other | downstream | 1141117 | 40043615 ~ 40049445 (+) | True | XLOC_032217 |
| TCONS_00062945 | other | downstream | 1643367 | 40545865 ~ 40546975 (+) | False | XLOC_032225 |
| TCONS_00062987 | other | downstream | 2292189 | 41194687 ~ 41194801 (+) | True | XLOC_032251 |
| TCONS_00062995 | other | downstream | 2552293 | 41454791 ~ 41454873 (+) | True | XLOC_032256 |
