Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062905 |
| length | 1011 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 7 |
| gene id | XLOC_032196 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 39098397 ~ 39105480 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050320-109 | Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in EVL; neuromast; olfactory placode; and peripheral olfactory organ. |
| ensembl_id | ENSDART00000188655 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00064906 | lncRNA | upstream | 143347 | 38953481 ~ 38955126 (+) | True | XLOC_032194 |
| TCONS_00062900 | lncRNA | upstream | 212935 | 38880442 ~ 38885538 (+) | True | XLOC_032192 |
| TCONS_00062888 | lncRNA | upstream | 508301 | 38518219 ~ 38590172 (+) | True | XLOC_032188 |
| TCONS_00064905 | lncRNA | upstream | 738030 | 38358681 ~ 38360443 (+) | True | XLOC_032185 |
| TCONS_00062878 | lncRNA | upstream | 1372548 | 37725309 ~ 37725925 (+) | True | XLOC_032181 |
| TCONS_00062917 | lncRNA | downstream | 266183 | 39370335 ~ 39378734 (+) | False | XLOC_032204 |
| TCONS_00064909 | lncRNA | downstream | 428326 | 39532478 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00064908 | lncRNA | downstream | 428326 | 39532478 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00064907 | lncRNA | downstream | 428326 | 39532478 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00064910 | lncRNA | downstream | 429342 | 39533494 ~ 39538006 (+) | False | XLOC_032208 |
| TCONS_00062903 | mRNA | upstream | 7143 | 39085969 ~ 39091330 (+) | True | XLOC_032195 |
| TCONS_00062901 | mRNA | upstream | 195975 | 38896158 ~ 38902498 (+) | False | XLOC_032193 |
| TCONS_00062902 | mRNA | upstream | 199306 | 38896240 ~ 38899167 (+) | True | XLOC_032193 |
| TCONS_00062898 | mRNA | upstream | 204974 | 38880166 ~ 38893499 (+) | False | XLOC_032192 |
| TCONS_00062906 | mRNA | downstream | 4706 | 39108858 ~ 39112234 (+) | False | XLOC_032197 |
| TCONS_00062907 | mRNA | downstream | 4796 | 39108948 ~ 39111923 (+) | True | XLOC_032197 |
| TCONS_00062908 | mRNA | downstream | 10193 | 39114345 ~ 39119142 (+) | True | XLOC_032198 |
| TCONS_00062909 | mRNA | downstream | 80084 | 39184236 ~ 39187657 (+) | True | XLOC_032199 |
| TCONS_00062910 | mRNA | downstream | 118446 | 39222598 ~ 39252851 (+) | False | XLOC_032200 |
| TCONS_00062894 | other | upstream | 240171 | 38845676 ~ 38858302 (+) | False | XLOC_032191 |
| TCONS_00062893 | other | upstream | 316315 | 38773418 ~ 38782158 (+) | True | XLOC_032190 |
| TCONS_00062884 | other | upstream | 721262 | 38377091 ~ 38377211 (+) | True | XLOC_032186 |
| TCONS_00062883 | other | upstream | 1010862 | 38087495 ~ 38087611 (+) | True | XLOC_032184 |
| TCONS_00062877 | other | upstream | 1381363 | 37715272 ~ 37717110 (+) | False | XLOC_032181 |
| TCONS_00062919 | other | downstream | 266468 | 39370620 ~ 39371875 (+) | True | XLOC_032204 |
| TCONS_00062936 | other | downstream | 939463 | 40043615 ~ 40049445 (+) | True | XLOC_032217 |
| TCONS_00062945 | other | downstream | 1441713 | 40545865 ~ 40546975 (+) | False | XLOC_032225 |
| TCONS_00062987 | other | downstream | 2090535 | 41194687 ~ 41194801 (+) | True | XLOC_032251 |
| TCONS_00062995 | other | downstream | 2350639 | 41454791 ~ 41454873 (+) | True | XLOC_032256 |
