RNA id: TCONS_00062922



Basic Information


Item Value
RNA id TCONS_00062922
length 1012
RNA type mRNA
GC content 0.46
exon number 3
gene id XLOC_032207
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39506043 ~ 39508375 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CGCTTCCGGTCTCCGGATCTCCAGCGCTCGCCTGCGCGACTAGTCTTCTTAACCGAAAGTGTAGTTTCCCCGAGTTAAAAATGTCGCTGTTTTTGAACGCTCTTGCTTTCATATGCAAAGTCCTCACACTGCCGCTGTTCGTTGGGGAGCGGGTGGGACTTTTGTCTTTCTACAAGCGCCTTTACCCCCGACTTTTGAGTAGTTTCACGATAGCGTACAATGAGCTAATGAATGACAAGAAACGGGAACTATTCCTAAACCTGGAGCGATTTCAGCCCTCCAAGGGCTCTTTGCGCATCCTGGAGGTGGGCTGCGGATCTGGGGCGAACTTCGAGCACTACCCGACGGGCTCCAAGATCACCTGCACAGACCCCAACCCGCATTTTAAGACATACCTGGAGAAAAGTATGGAGAAGAACGAGCACCTGGTGTACGACAGCTTCATAGTGGCGTCGGGGGAGAATCTGCAGGCGGTGGAGGACAGCTCGGTGGATGCTGTGGTTTGCACTCTGGTTCTGTGCACGGTCAAAGACACCAACAAAGTTCTGCAGGAGGCAAAAAGGGTCCTGAGGCCTGGTGGAGCATTTTTCTTCCTTGAGCATGTGGTGTCAGACCCTTCAACCTGGGCTTACTTTTTTCAGCATGTTCTCCAGCCATTTTGGTACTATCTTCAAGATGGCTGTGAAGCAATCCGTGCTACATGGAAGGACATTGACAATGCTGGATTTTCAGATGTGAAACTACGGCACATTCAAGCTCCTCTGTTTTTTATGATCAAACCACACATCATTGGTTatgcagtaaaataatgaatatgaaTAATTTCCCACTACCTCCATAGAAAAATCTTCCAAAGATTTTCTCAAGCACGTTTTCCTTCAGCAAGCCCTAGTCATTTCACTTACTTTTAAGTATGTTTaaccaaaaacaaaagaaaaaaaggaatgtTTGTTCAACAAGTGAAGACTTAACGTTTTGTTATTGCACAAGTATGtctctgtaaaataaacaa

Function


GO:

id name namespace
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061027-239 Predicted to enable methyltransferase activity. Orthologous to human METTL7A (methyltransferase like 7A).

Ensembl:

ensembl_id ENSDART00000086260

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00062917 lncRNA upstream 127309 39370335 ~ 39378734 (+) False XLOC_032204
TCONS_00064906 lncRNA upstream 550917 38953481 ~ 38955126 (+) True XLOC_032194
TCONS_00062900 lncRNA upstream 620505 38880442 ~ 38885538 (+) True XLOC_032192
TCONS_00062888 lncRNA upstream 915871 38518219 ~ 38590172 (+) True XLOC_032188
TCONS_00064905 lncRNA upstream 1145600 38358681 ~ 38360443 (+) True XLOC_032185
TCONS_00064909 lncRNA downstream 24103 39532478 ~ 39538006 (+) False XLOC_032208
TCONS_00064908 lncRNA downstream 24103 39532478 ~ 39538006 (+) False XLOC_032208
TCONS_00064907 lncRNA downstream 24103 39532478 ~ 39538006 (+) False XLOC_032208
TCONS_00064910 lncRNA downstream 25119 39533494 ~ 39538006 (+) False XLOC_032208
TCONS_00064675 lncRNA downstream 25119 39533494 ~ 39538006 (+) False XLOC_032208
TCONS_00062921 mRNA upstream 2662 39499623 ~ 39503381 (+) True XLOC_032206
TCONS_00062920 mRNA upstream 8069 39493864 ~ 39497974 (+) True XLOC_032205
TCONS_00062918 mRNA upstream 130521 39370615 ~ 39375522 (+) False XLOC_032204
TCONS_00062915 mRNA upstream 140576 39360377 ~ 39365467 (+) False XLOC_032203
TCONS_00062916 mRNA upstream 141086 39360469 ~ 39364957 (+) True XLOC_032203
TCONS_00062923 mRNA downstream 28221 39536596 ~ 39541448 (+) False XLOC_032208
TCONS_00062926 mRNA downstream 304100 39812475 ~ 39831089 (+) True XLOC_032211
TCONS_00062927 mRNA downstream 328099 39836474 ~ 39866670 (+) True XLOC_032212
TCONS_00062928 mRNA downstream 396646 39905021 ~ 39912440 (+) True XLOC_032214
TCONS_00062929 mRNA downstream 414677 39923052 ~ 39991554 (+) False XLOC_032215
TCONS_00062919 other upstream 134168 39370620 ~ 39371875 (+) True XLOC_032204
TCONS_00062894 other upstream 647741 38845676 ~ 38858302 (+) False XLOC_032191
TCONS_00062893 other upstream 723885 38773418 ~ 38782158 (+) True XLOC_032190
TCONS_00062884 other upstream 1128832 38377091 ~ 38377211 (+) True XLOC_032186
TCONS_00062883 other upstream 1418432 38087495 ~ 38087611 (+) True XLOC_032184
TCONS_00062936 other downstream 535240 40043615 ~ 40049445 (+) True XLOC_032217
TCONS_00062945 other downstream 1037490 40545865 ~ 40546975 (+) False XLOC_032225
TCONS_00062987 other downstream 1686312 41194687 ~ 41194801 (+) True XLOC_032251
TCONS_00062995 other downstream 1946416 41454791 ~ 41454873 (+) True XLOC_032256
TCONS_00062996 other downstream 1955410 41463785 ~ 41493470 (+) False XLOC_032257

Expression Profile


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