RNA id: TCONS_00062936



Basic Information


Item Value
RNA id TCONS_00062936
length 532
RNA type processed_transcript
GC content 0.48
exon number 3
gene id XLOC_032217
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40043615 ~ 40049445 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GTCGAGCGTCATGGCATGTTGGCTGCGGACGAGTTGGGGGAAAGATGCTCATTTTATCCATAATATGCTTCCTAAAGGCACTACTGCTGCATTTTCGCTGTCCCAACAAACCACATGCCATTTGAAATCGTACCTGCGCAGAAAGCAGATCCATCATAAACATTGGAGGTCTCTCTGAAAGGGCTATCGGTTCCGCTGACATCATGGTGGTCTCTGCTGATCACCACTGGAGCCTGACTTCGCGGATCCAGCGGATGTTGTCGCTGTATTGCTGTCGGACTCGTTCAGTAACTGTGGAGCTGATGTCTTCTAGTACAGCGGTAGCGATTGCATCTGTCTCCACCAGGTCAGCAGGGTCACCAGAGGTACAGACCCAACGAAATGGCCCAAAACCCAGTGAAAAAATGTCTCTACAGGCACGAGCAAAGAATAAAGTGAGTCTgctaatgtgtgtatgtgtatatgtgtgttagtGGATAGTTGCTTACCCCATTATGTGCTGGACATATGAGGGATATTTAAACTCAGTTGC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000155303

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00064913 lncRNA upstream 26478 40004595 ~ 40017137 (+) True XLOC_032216
TCONS_00064912 lncRNA upstream 161388 39874524 ~ 39882227 (+) True XLOC_032213
TCONS_00062925 lncRNA upstream 326057 39700200 ~ 39717558 (+) True XLOC_032210
TCONS_00062924 lncRNA upstream 376043 39666347 ~ 39667572 (+) True XLOC_032209
TCONS_00064909 lncRNA upstream 505609 39532478 ~ 39538006 (+) False XLOC_032208
TCONS_00062939 lncRNA downstream 399189 40448634 ~ 40451840 (+) True XLOC_032220
TCONS_00062941 lncRNA downstream 426266 40475711 ~ 40481661 (+) False XLOC_032222
TCONS_00062942 lncRNA downstream 427929 40477374 ~ 40481777 (+) True XLOC_032222
TCONS_00064915 lncRNA downstream 496413 40545858 ~ 40551992 (+) False XLOC_032225
TCONS_00064914 lncRNA downstream 496413 40545858 ~ 40551992 (+) False XLOC_032225
TCONS_00062929 mRNA upstream 52061 39923052 ~ 39991554 (+) False XLOC_032215
TCONS_00062933 mRNA upstream 52617 39930825 ~ 39990998 (+) False XLOC_032215
TCONS_00062934 mRNA upstream 52617 39930825 ~ 39990998 (+) False XLOC_032215
TCONS_00062932 mRNA upstream 52617 39930825 ~ 39990998 (+) False XLOC_032215
TCONS_00062931 mRNA upstream 52617 39930825 ~ 39990998 (+) False XLOC_032215
TCONS_00062937 mRNA downstream 304979 40354424 ~ 40405934 (+) True XLOC_032218
TCONS_00062938 mRNA downstream 388542 40437987 ~ 40439615 (+) True XLOC_032219
TCONS_00062940 mRNA downstream 418117 40467562 ~ 40470521 (+) True XLOC_032221
TCONS_00062943 mRNA downstream 432885 40482330 ~ 40499799 (+) True XLOC_032223
TCONS_00062944 mRNA downstream 473925 40523370 ~ 40544207 (+) True XLOC_032224
TCONS_00062919 other upstream 671740 39370620 ~ 39371875 (+) True XLOC_032204
TCONS_00062894 other upstream 1185313 38845676 ~ 38858302 (+) False XLOC_032191
TCONS_00062893 other upstream 1261457 38773418 ~ 38782158 (+) True XLOC_032190
TCONS_00062884 other upstream 1666404 38377091 ~ 38377211 (+) True XLOC_032186
TCONS_00062883 other upstream 1956004 38087495 ~ 38087611 (+) True XLOC_032184
TCONS_00062945 other downstream 496420 40545865 ~ 40546975 (+) False XLOC_032225
TCONS_00062987 other downstream 1145242 41194687 ~ 41194801 (+) True XLOC_032251
TCONS_00062995 other downstream 1405346 41454791 ~ 41454873 (+) True XLOC_032256
TCONS_00062996 other downstream 1414340 41463785 ~ 41493470 (+) False XLOC_032257
TCONS_00063008 other downstream 1803927 41853372 ~ 41869189 (+) True XLOC_032262

Expression Profile


//