Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062947 |
| length | 1444 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 8 |
| gene id | XLOC_032226 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 40554551 ~ 40563509 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0072711 | cellular response to hydroxyurea | biological_process |
| GO:0016485 | protein processing | biological_process |
| GO:0031647 | regulation of protein stability | biological_process |
| GO:0010498 | proteasomal protein catabolic process | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0097752 | regulation of DNA stability | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005694 | chromosome | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004190 | aspartic-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0042802 | identical protein binding | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-031030-15 | Predicted to enable aspartic-type endopeptidase activity and identical protein binding activity. Predicted to be involved in several processes, including cellular response to hydroxyurea; proteolysis; and regulation of DNA stability. Predicted to act upstream of or within proteolysis. Predicted to be located in chromosome and cytosol. Orthologous to several human genes including DDI2 (DNA damage inducible 1 homolog 2). |
| ensembl_id | ENSDART00000155928 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00064915 | lncRNA | upstream | 2618 | 40545858 ~ 40551992 (+) | False | XLOC_032225 |
| TCONS_00062949 | lncRNA | downstream | 4209 | 40564274 ~ 40566521 (+) | False | XLOC_032227 |
| TCONS_00062951 | lncRNA | downstream | 10714 | 40570779 ~ 40572104 (+) | True | XLOC_032227 |
| TCONS_00064919 | lncRNA | downstream | 92840 | 40652905 ~ 40656046 (+) | False | XLOC_032231 |
| TCONS_00064920 | lncRNA | downstream | 92855 | 40652920 ~ 40654146 (+) | True | XLOC_032231 |
| TCONS_00062958 | lncRNA | downstream | 102468 | 40662533 ~ 40664317 (+) | True | XLOC_032232 |
| TCONS_00062944 | mRNA | upstream | 10403 | 40523370 ~ 40544207 (+) | True | XLOC_032224 |
| TCONS_00062943 | mRNA | upstream | 54811 | 40482330 ~ 40499799 (+) | True | XLOC_032223 |
| TCONS_00062940 | mRNA | upstream | 84089 | 40467562 ~ 40470521 (+) | True | XLOC_032221 |
| TCONS_00062938 | mRNA | upstream | 114995 | 40437987 ~ 40439615 (+) | True | XLOC_032219 |
| TCONS_00062937 | mRNA | upstream | 148676 | 40354424 ~ 40405934 (+) | True | XLOC_032218 |
| TCONS_00062948 | mRNA | downstream | 3783 | 40563848 ~ 40572550 (+) | False | XLOC_032227 |
| TCONS_00062950 | mRNA | downstream | 4364 | 40564429 ~ 40572384 (+) | False | XLOC_032227 |
| TCONS_00062952 | mRNA | downstream | 13300 | 40573365 ~ 40577109 (+) | True | XLOC_032228 |
| TCONS_00062953 | mRNA | downstream | 27486 | 40587551 ~ 40606273 (+) | False | XLOC_032229 |
| TCONS_00062954 | mRNA | downstream | 31084 | 40591149 ~ 40604033 (+) | False | XLOC_032229 |
| TCONS_00062945 | other | upstream | 7635 | 40545865 ~ 40546975 (+) | False | XLOC_032225 |
| TCONS_00062936 | other | upstream | 505165 | 40043615 ~ 40049445 (+) | True | XLOC_032217 |
| TCONS_00062919 | other | upstream | 1182735 | 39370620 ~ 39371875 (+) | True | XLOC_032204 |
| TCONS_00062894 | other | upstream | 1696308 | 38845676 ~ 38858302 (+) | False | XLOC_032191 |
| TCONS_00062893 | other | upstream | 1772452 | 38773418 ~ 38782158 (+) | True | XLOC_032190 |
| TCONS_00062987 | other | downstream | 634622 | 41194687 ~ 41194801 (+) | True | XLOC_032251 |
| TCONS_00062995 | other | downstream | 894726 | 41454791 ~ 41454873 (+) | True | XLOC_032256 |
| TCONS_00062996 | other | downstream | 903720 | 41463785 ~ 41493470 (+) | False | XLOC_032257 |
| TCONS_00063008 | other | downstream | 1293307 | 41853372 ~ 41869189 (+) | True | XLOC_032262 |
| TCONS_00063013 | other | downstream | 1437898 | 41997963 ~ 41998096 (+) | True | XLOC_032265 |
