Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062951 |
| length | 866 |
| lncRNA type | retained_intron |
| GC content | 0.43 |
| exon number | 6 |
| gene id | XLOC_032227 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 40563848 ~ 40572550 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0090630 | activation of GTPase activity | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005085 | guanyl-nucleotide exchange factor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-5406 | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in activation of GTPase activity. Predicted to be active in cytoplasm and nucleus. |
| ensembl_id | ENSDART00000156641 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00062949 | lncRNA | upstream | 4258 | 40564274 ~ 40566521 (+) | False | XLOC_032227 |
| TCONS_00064915 | lncRNA | upstream | 18787 | 40545858 ~ 40551992 (+) | False | XLOC_032225 |
| TCONS_00064919 | lncRNA | downstream | 80801 | 40652905 ~ 40656046 (+) | False | XLOC_032231 |
| TCONS_00064920 | lncRNA | downstream | 80816 | 40652920 ~ 40654146 (+) | True | XLOC_032231 |
| TCONS_00062958 | lncRNA | downstream | 90429 | 40662533 ~ 40664317 (+) | True | XLOC_032232 |
| TCONS_00062966 | lncRNA | downstream | 265546 | 40837650 ~ 40840901 (+) | True | XLOC_032238 |
| TCONS_00064921 | lncRNA | downstream | 412493 | 40984597 ~ 40986135 (+) | True | XLOC_032242 |
| TCONS_00062946 | mRNA | upstream | 7270 | 40554551 ~ 40563509 (+) | False | XLOC_032226 |
| TCONS_00062947 | mRNA | upstream | 10714 | 40554610 ~ 40560065 (+) | True | XLOC_032226 |
| TCONS_00062944 | mRNA | upstream | 26572 | 40523370 ~ 40544207 (+) | True | XLOC_032224 |
| TCONS_00062943 | mRNA | upstream | 70980 | 40482330 ~ 40499799 (+) | True | XLOC_032223 |
| TCONS_00062940 | mRNA | upstream | 100258 | 40467562 ~ 40470521 (+) | True | XLOC_032221 |
| TCONS_00062952 | mRNA | downstream | 1261 | 40573365 ~ 40577109 (+) | True | XLOC_032228 |
| TCONS_00062953 | mRNA | downstream | 15447 | 40587551 ~ 40606273 (+) | False | XLOC_032229 |
| TCONS_00062954 | mRNA | downstream | 19045 | 40591149 ~ 40604033 (+) | False | XLOC_032229 |
| TCONS_00062955 | mRNA | downstream | 19110 | 40591214 ~ 40604033 (+) | True | XLOC_032229 |
| TCONS_00062956 | mRNA | downstream | 56962 | 40629066 ~ 40646203 (+) | True | XLOC_032230 |
| TCONS_00062945 | other | upstream | 23804 | 40545865 ~ 40546975 (+) | False | XLOC_032225 |
| TCONS_00062936 | other | upstream | 521334 | 40043615 ~ 40049445 (+) | True | XLOC_032217 |
| TCONS_00062919 | other | upstream | 1198904 | 39370620 ~ 39371875 (+) | True | XLOC_032204 |
| TCONS_00062894 | other | upstream | 1712477 | 38845676 ~ 38858302 (+) | False | XLOC_032191 |
| TCONS_00062893 | other | upstream | 1788621 | 38773418 ~ 38782158 (+) | True | XLOC_032190 |
| TCONS_00062987 | other | downstream | 622583 | 41194687 ~ 41194801 (+) | True | XLOC_032251 |
| TCONS_00062995 | other | downstream | 882687 | 41454791 ~ 41454873 (+) | True | XLOC_032256 |
| TCONS_00062996 | other | downstream | 891681 | 41463785 ~ 41493470 (+) | False | XLOC_032257 |
| TCONS_00063008 | other | downstream | 1281268 | 41853372 ~ 41869189 (+) | True | XLOC_032262 |
| TCONS_00063013 | other | downstream | 1425859 | 41997963 ~ 41998096 (+) | True | XLOC_032265 |
