Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062952 |
| length | 711 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 4 |
| gene id | XLOC_032228 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 40573365 ~ 40577109 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:2001014 | regulation of skeletal muscle cell differentiation | biological_process |
| GO:0002082 | regulation of oxidative phosphorylation | biological_process |
| GO:0034551 | mitochondrial respiratory chain complex III assembly | biological_process |
| GO:0070131 | positive regulation of mitochondrial translation | biological_process |
| GO:0050796 | regulation of insulin secretion | biological_process |
| GO:1903364 | positive regulation of cellular protein catabolic process | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0005758 | mitochondrial intermembrane space | cellular_component |
| GO:0005759 | mitochondrial matrix | cellular_component |
| GO:0042645 | mitochondrial nucleoid | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1726 | Predicted to be involved in several processes, including mitochondrial respiratory chain complex III assembly; positive regulation of mitochondrial translation; and regulation of insulin secretion. Predicted to be located in mitochondrial inner membrane; mitochondrial intermembrane space; and mitochondrial nucleoid. Predicted to be active in mitochondrial matrix. Is expressed in intestinal bulb; intestinal bulb primordium; liver; and pectoral fin musculature. Human ortholog(s) of this gene implicated in mitochondrial complex III deficiency nuclear type 7. Orthologous to human UQCC2 (ubiquinol-cytochrome c reductase complex assembly factor 2). |
| ensembl_id | ENSDART00000004075 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00062951 | lncRNA | upstream | 1261 | 40570779 ~ 40572104 (+) | True | XLOC_032227 |
| TCONS_00062949 | lncRNA | upstream | 6844 | 40564274 ~ 40566521 (+) | False | XLOC_032227 |
| TCONS_00064915 | lncRNA | upstream | 21373 | 40545858 ~ 40551992 (+) | False | XLOC_032225 |
| TCONS_00064919 | lncRNA | downstream | 75796 | 40652905 ~ 40656046 (+) | False | XLOC_032231 |
| TCONS_00064920 | lncRNA | downstream | 75811 | 40652920 ~ 40654146 (+) | True | XLOC_032231 |
| TCONS_00062958 | lncRNA | downstream | 85424 | 40662533 ~ 40664317 (+) | True | XLOC_032232 |
| TCONS_00062966 | lncRNA | downstream | 260541 | 40837650 ~ 40840901 (+) | True | XLOC_032238 |
| TCONS_00064921 | lncRNA | downstream | 407488 | 40984597 ~ 40986135 (+) | True | XLOC_032242 |
| TCONS_00062948 | mRNA | upstream | 815 | 40563848 ~ 40572550 (+) | False | XLOC_032227 |
| TCONS_00062950 | mRNA | upstream | 981 | 40564429 ~ 40572384 (+) | False | XLOC_032227 |
| TCONS_00062946 | mRNA | upstream | 9856 | 40554551 ~ 40563509 (+) | False | XLOC_032226 |
| TCONS_00062947 | mRNA | upstream | 13300 | 40554610 ~ 40560065 (+) | True | XLOC_032226 |
| TCONS_00062944 | mRNA | upstream | 29158 | 40523370 ~ 40544207 (+) | True | XLOC_032224 |
| TCONS_00062953 | mRNA | downstream | 10442 | 40587551 ~ 40606273 (+) | False | XLOC_032229 |
| TCONS_00062954 | mRNA | downstream | 14040 | 40591149 ~ 40604033 (+) | False | XLOC_032229 |
| TCONS_00062955 | mRNA | downstream | 14105 | 40591214 ~ 40604033 (+) | True | XLOC_032229 |
| TCONS_00062956 | mRNA | downstream | 51957 | 40629066 ~ 40646203 (+) | True | XLOC_032230 |
| TCONS_00062957 | mRNA | downstream | 84594 | 40661703 ~ 40669406 (+) | False | XLOC_032232 |
| TCONS_00062945 | other | upstream | 26390 | 40545865 ~ 40546975 (+) | False | XLOC_032225 |
| TCONS_00062936 | other | upstream | 523920 | 40043615 ~ 40049445 (+) | True | XLOC_032217 |
| TCONS_00062919 | other | upstream | 1201490 | 39370620 ~ 39371875 (+) | True | XLOC_032204 |
| TCONS_00062894 | other | upstream | 1715063 | 38845676 ~ 38858302 (+) | False | XLOC_032191 |
| TCONS_00062893 | other | upstream | 1791207 | 38773418 ~ 38782158 (+) | True | XLOC_032190 |
| TCONS_00062987 | other | downstream | 617578 | 41194687 ~ 41194801 (+) | True | XLOC_032251 |
| TCONS_00062995 | other | downstream | 877682 | 41454791 ~ 41454873 (+) | True | XLOC_032256 |
| TCONS_00062996 | other | downstream | 886676 | 41463785 ~ 41493470 (+) | False | XLOC_032257 |
| TCONS_00063008 | other | downstream | 1276263 | 41853372 ~ 41869189 (+) | True | XLOC_032262 |
| TCONS_00063013 | other | downstream | 1420854 | 41997963 ~ 41998096 (+) | True | XLOC_032265 |
