RNA id: TCONS_00062961



Basic Information


Item Value
RNA id TCONS_00062961
length 1236
RNA type mRNA
GC content 0.42
exon number 8
gene id XLOC_032234
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40714811 ~ 40717048 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


AGAATATTTTTATGTCGCCTCAGAATGATTGCTGCTTGTTAAACACGTAATTTCTGTGAAAATAAGTGTGTTGACATTGAAAGCCTGGAAATGAAGCCCAGTGTCTGGAATATAAAGGAGATGTTGAGCATCCCCTCAACTTCTGGAGGAATGAAAGCTAGTAAGGGCCCGGGAACCAGTGACTACTCCAGCCTGTCTGACTCTCAGTTGTTGCTGGGATCCCAAATGTGGCCTGACAATTCACAAGGGTTTTCTCTAGAGATGAGTGGACAGAGCAAAGGTTCACAACATACTTCACAGGAGatgAAGGAAATGACCGTGTCCAGCAGTTATAGTTCTAAGCCTTTTTTGTTTGGCAGTGATGGGAAATTCCCAAGCTTCACCAGTGGCAAATCTGTTGGCGTCTTGGACAGATTTGAGGAAGAGAAGAGaaaagccaaagaaaaatatGAAAGGGAATTTCTTACTAATGGAATTCTAAAACTGCAGGAATATCTGGAAAATaccagagaGACCTTATTAAACCGCTTTGATGGAAGTAATGACATTACCAGGAACATTTTGGTAGAGAGAATGGATCATTTTTCAAAAACAATTGAAGGTTATTTAAACAGTTTGAAAATGGGTATAACATGTCAGTTTGAGACTCTGcagaaccaaacacaaacagaatTAACAGACAGGGAAGCCAAGAGTGCTCTGGCTGCAAAAGAATTAAGCTCAAATATGCTTAACCTCCAACGAGATCTGGAAGCCCTGAAAGCAGAGCAAAGCAAAGAGCAGGGCATGCTGGGAAAAATTCTGTCTCAACTCTGCACTTTGATTTCTATACATAAGCCGACAGCAGGACCTGGCTCTGCCAGAATGATTGACAGTGAGGTTCAGACATCACCAAGACTGTTTGAAAGGTTCTGTGTAATGTTGGCTGAAAAACATGACGAGAAAAAGATGATATTTAGCAGGCCTGTCATTTATTCAGGAAAAGCTGTAGAACAGAACCAATGTCCTCTTACAACAGAAAAGACACAAAACAGAAATGCACATGCTCTGCCTGTACCAAGGCAGCAGACACTAGTCACTGAAGAGGTTTTCCTTGATGCTTCACAGGAATTTTGGTGCAAAAAGTTAGTTGAGAGCAGACCTTCTATCCCACTTGTGGATGATCAGTCCACTGCATCCACAGAGGACCACAGAAGAAAATTTGTAGATAGACCCCTGGAGTCTGAAAAACCAATG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000153868

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00062958 lncRNA upstream 50494 40662533 ~ 40664317 (+) True XLOC_032232
TCONS_00064919 lncRNA upstream 58765 40652905 ~ 40656046 (+) False XLOC_032231
TCONS_00064920 lncRNA upstream 60665 40652920 ~ 40654146 (+) True XLOC_032231
TCONS_00062951 lncRNA upstream 142707 40570779 ~ 40572104 (+) True XLOC_032227
TCONS_00062949 lncRNA upstream 148290 40564274 ~ 40566521 (+) False XLOC_032227
TCONS_00062966 lncRNA downstream 120602 40837650 ~ 40840901 (+) True XLOC_032238
TCONS_00064921 lncRNA downstream 267549 40984597 ~ 40986135 (+) True XLOC_032242
TCONS_00064922 lncRNA downstream 363462 41080510 ~ 41082985 (+) True XLOC_032245
TCONS_00062980 lncRNA downstream 379125 41096173 ~ 41102304 (+) False XLOC_032246
TCONS_00063001 lncRNA downstream 788067 41505115 ~ 41505986 (+) True XLOC_032258
TCONS_00062959 mRNA upstream 25769 40671336 ~ 40689042 (+) False XLOC_032233
TCONS_00062960 mRNA upstream 32255 40671427 ~ 40682556 (+) True XLOC_032233
TCONS_00062957 mRNA upstream 45405 40661703 ~ 40669406 (+) False XLOC_032232
TCONS_00062956 mRNA upstream 68608 40629066 ~ 40646203 (+) True XLOC_032230
TCONS_00062953 mRNA upstream 108538 40587551 ~ 40606273 (+) False XLOC_032229
TCONS_00062962 mRNA downstream 6506 40723554 ~ 40732692 (+) True XLOC_032235
TCONS_00062963 mRNA downstream 58752 40775800 ~ 40783641 (+) True XLOC_032236
TCONS_00062964 mRNA downstream 76967 40794015 ~ 40803800 (+) True XLOC_032237
TCONS_00062965 mRNA downstream 115587 40832635 ~ 40841032 (+) False XLOC_032238
TCONS_00062967 mRNA downstream 157158 40874206 ~ 40875253 (+) True XLOC_032239
TCONS_00062945 other upstream 167836 40545865 ~ 40546975 (+) False XLOC_032225
TCONS_00062936 other upstream 665366 40043615 ~ 40049445 (+) True XLOC_032217
TCONS_00062919 other upstream 1342936 39370620 ~ 39371875 (+) True XLOC_032204
TCONS_00062894 other upstream 1856509 38845676 ~ 38858302 (+) False XLOC_032191
TCONS_00062893 other upstream 1932653 38773418 ~ 38782158 (+) True XLOC_032190
TCONS_00062987 other downstream 477639 41194687 ~ 41194801 (+) True XLOC_032251
TCONS_00062995 other downstream 737743 41454791 ~ 41454873 (+) True XLOC_032256
TCONS_00062996 other downstream 746737 41463785 ~ 41493470 (+) False XLOC_032257
TCONS_00063008 other downstream 1136324 41853372 ~ 41869189 (+) True XLOC_032262
TCONS_00063013 other downstream 1280915 41997963 ~ 41998096 (+) True XLOC_032265

Expression Profile


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