RNA id: TCONS_00062976


Basic Information

Item Value
RNA id TCONS_00062976
length 2484
RNA type mRNA
GC content 0.41
exon number 10
gene id XLOC_032244
representative False

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 41038757 ~ 41060423 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGTAAAagtcatgtttgtgtgtgtgttgtgctacAATGTTAAACCAAGGACTTTAACACAATAGATACCCAGAGAGATTAGTTATTAAGTAACAGTTGTTATTGGTGGAGAAGGTTAGTGCATGGTTTCAGTTTGATTGAGATAAGGGCTGTTTTTCAGTTCCCACATATCAGAGGACATCCTGTCAAATTCTTCAAGTAAAACCTGCTGGAAATTATTCAGCCTGTGACAGTAATATAACTGGACTCGAGCCAGTCAGGCTTTGAGGTTGTAaagcagggtgtgtgtgtgtatgtatgtgtgtgtagaggAAAAGTTGGTGAGTGtgctgttatgtgtgtgtgtgtgtgtaatgagctGAAGATATACTGGGGAAGTGGGAGTTTAACTTCAGTTTCCAGAGGCCCGGCTGGAGTAAAGGTGTGGAGGAATCAACATCCCATATACCTGGCTTCAATATACGGGATATACTTTGTTcataaagaaaggaaaaaagACTGCAGAAATGGTTCATATGAAGGCTATTTTGCTGGGTGCTGCAATGGCAGCCGTGGCTGTGACAACCATCATCGCTTTGATTCTGGCTCTTGCAAACCGGCAGACTTTGGATCAGCCATACTCAACACAGTTCGGGATTGTTTTTGATGCCGGCTCCAGCCACACTGCCCTTTTCCTGTACCAGTGGCAGggaaacaaagaaaacaacaCTGGAATCGTGTCGCAGAAACAGAGCTGCGATGTGGATGGTGATGGCATATCAAGCTATGTCCAGAACCCTGCAGGAGCGGGAGAAAGTCTGAAGAAATGCTTGGACATTGCTAAGGCAGCAATACCAACAGAACAGCAGAAGTCCACACCTGTGTACCTCGGTGCCACTGCTGGCATGCGGCTTCTAAACTTACAGAACCAAACTCAATCAGACAGCATCCTTGCAGAGGTCGCCAAAACAATTCAAACTTACCCATTTGATTTCCGAGGAGCCAGAATACTCACAGGGATGGAGGAGGGAGCTTATGGCTGGATCACCACCAACTACCTCTTGGAGAGCTTTATTAAGCACACATTTGAGGGCTCCTGGATCCACCCTAAAGCCGGAAAGATCATTGGAGCTCTCGATCTCGGTGGTGCATCAACACAGATCTCCTTTACCCCAAAAGACCCAGTCAGAGACCCAAATTCAGCATTTAATCTCCAACTTTATGGGTATAAATATGAGTTGTACACTTACAGCTACTTGTGTTACGGCAAAGACCAGGCTTTGAAGAAACTCCAAGCCTACCTTCACAAGAATGCGGGATCATCATCATCTATCAGTCACCCCTGCTACCACAAAGGATATAATCTCAATCTTACTCTGGCTGAACTTTACAACTCCCCTTGTGTGGTCCCACCAAGCAGTTTCAACCCCAAGGATACAATCCTTTTTAAGGGAACAGGAAATTCATCCCTTTGCCTATCTCTAATAGAAAACATTGTTAATCTCACTGGTTGTGCATTATCCCCTGACTGTGGCTTCAATGGCATCTATCAGCCTCCAGTCAACGGCGAATTCTTTGCTTTTTCTGCATACTTCTACACATTTGACTTCCTCGGTCTTACTCCAAAAGCTCCACTAACAAAAGTTCTTTCCACTATTGACACTCTCTGCAGCAAAAACTGGACAGCTCTAACTGCTGAAAATCCATCCATTAAGCCAAAATACCTGAAAGATTATTGTGCTTCTGGTCACTATATTACTACTATTCTCTTGAAAGGATACAAGTTCAATAACACCTGGGATCAAATTTCTTTTGTAAAACAGGTTGCAGATACAGATATTGGTTGGACGCTGGGCTACATGCTGAACCTGACCAACATGATTCCTTCTGAACGCTCCAGTGCCGTTACTGGAGTGCCACACAGTCAATGGGCCGCTGAGATTTTCTTCATCGCATTTGCCCTCTTCCTCACTCTACTTATTATAGTCATCCTATCTGTCCGTGATATAACTAAGTAAACTGTGttatgaatatatgtatgtacATTAGTATTTATCAGATAATAGACATGTAAATGGACGAGGAACTATTGTTTACACAAACactgaactcttttttttttcattctgtacATTTGTAGTTGATATTTCTTCATAACTTATTCAAAGTAGTGTCTTGTTTTTTATGGCTGACTAGTTCATACCTCAATCATTTAGTCTGTGCCAAATAATAATACATGAAATTTGGTTACAGAGATTTTTCTTTATTCATAAACTGAATTATGggagtttagtttttttaaggaACAAAAAGCACttaacagatattaaataaagctatagttacattattataaaaatgaagaaaatgtactGTGCTTTGTACATATTTATAGAATTAAGCAATATTGTAAAAGCAGCTTGTGTTTCCAGTTTAGCCTTCACTTtttgtttggggtcagtaagatttttacaaatttctaaaataaaacattccaTTGTTTTAT

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-142 Predicted to enable guanosine-diphosphatase activity and uridine-diphosphatase activity. Predicted to be involved in nucleoside diphosphate catabolic process. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in brain; heart; and liver. Orthologous to human ENTPD8 (ectonucleoside triphosphate diphosphohydrolase 8).

Ensembl:

ensembl_id ENSDART00000011245

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00064921 lncRNA upstream 52622 40984597 ~ 40986135 (+) True XLOC_032242
TCONS_00062966 lncRNA upstream 197856 40837650 ~ 40840901 (+) True XLOC_032238
TCONS_00062958 lncRNA upstream 374440 40662533 ~ 40664317 (+) True XLOC_032232
TCONS_00064919 lncRNA upstream 382711 40652905 ~ 40656046 (+) False XLOC_032231
TCONS_00064922 lncRNA downstream 23142 41080510 ~ 41082985 (+) True XLOC_032245
TCONS_00062980 lncRNA downstream 38805 41096173 ~ 41102304 (+) False XLOC_032246
TCONS_00063001 lncRNA downstream 447747 41505115 ~ 41505986 (+) True XLOC_032258
TCONS_00063004 lncRNA downstream 576701 41634069 ~ 41648856 (+) False XLOC_032259
TCONS_00063005 lncRNA downstream 576811 41634179 ~ 41670341 (+) False XLOC_032259
TCONS_00062974 mRNA upstream 29376 40992409 ~ 41009381 (+) False XLOC_032243
TCONS_00062975 mRNA upstream 35534 40992883 ~ 41003223 (+) True XLOC_032243
TCONS_00062972 mRNA upstream 70437 40951227 ~ 40968320 (+) False XLOC_032241
TCONS_00062973 mRNA upstream 74603 40952031 ~ 40964154 (+) True XLOC_032241
TCONS_00062968 mRNA upstream 91086 40922572 ~ 40947671 (+) False XLOC_032240
TCONS_00062979 mRNA downstream 38690 41096058 ~ 41116053 (+) False XLOC_032246
TCONS_00062981 mRNA downstream 42419 41099787 ~ 41117242 (+) True XLOC_032246
TCONS_00062982 mRNA downstream 86787 41144155 ~ 41160544 (+) False XLOC_032247
TCONS_00062983 mRNA downstream 86835 41144203 ~ 41161017 (+) True XLOC_032247
TCONS_00062984 mRNA downstream 124501 41181869 ~ 41183823 (+) True XLOC_032248
TCONS_00062945 other upstream 491782 40545865 ~ 40546975 (+) False XLOC_032225
TCONS_00062936 other upstream 989312 40043615 ~ 40049445 (+) True XLOC_032217
TCONS_00062919 other upstream 1666882 39370620 ~ 39371875 (+) True XLOC_032204
TCONS_00062894 other upstream 2180455 38845676 ~ 38858302 (+) False XLOC_032191
TCONS_00062893 other upstream 2256599 38773418 ~ 38782158 (+) True XLOC_032190
TCONS_00062987 other downstream 137319 41194687 ~ 41194801 (+) True XLOC_032251
TCONS_00062995 other downstream 397423 41454791 ~ 41454873 (+) True XLOC_032256
TCONS_00062996 other downstream 406417 41463785 ~ 41493470 (+) False XLOC_032257
TCONS_00063008 other downstream 796004 41853372 ~ 41869189 (+) True XLOC_032262
TCONS_00063013 other downstream 940595 41997963 ~ 41998096 (+) True XLOC_032265

Expression Profile

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