RNA id: TCONS_00062996



Basic Information


Item Value
RNA id TCONS_00062996
length 834
RNA type processed_transcript
GC content 0.53
exon number 6
gene id XLOC_032257
representative False

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 41463785 ~ 41501766 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CCCTCTCGCTTGGATAGCTCACAGTCTGTCAAACACCAGACTCTTACTTCATTCTGCTGCTTTCACACCGCTGTGTTTCTGATAGGTTAACGCACTGACCACTGCTTGAAGAGAGTTTGTAAAAAGAAGATCCTCCAGGTGACCTGACCTGAGCATCCAGCTTCATCCAACTTCAGAAGGTTTCTTGGCGGGTGGGAAGGCACCACACTGACCCGCCATGTTTCTGGTTCTGGTGGTTACAGAGGAGCTGAGGGAGTTTCTGGCCCGGGCACGAAACGGAACCGGCCGCCTCATCCAGGTGTTGATCAGAGACGAGCAGCTGGTGCTGGGGGCGTACAGAGAACCCCGTCACAGTTGGGACAAAGACTACGACCCAGTCCTACTCCCCCTGCTGGACCCGCTCGAGCCCTGCTATATCTTATACCGGCTGGACTCCAAAAACGCACAAGGCTATGAGTGGCTCTTCATCTCCTGGTCTCCGGACCAGTCGCCTGTCCGACAGAAGATGCTTTACGCTGCCACTCGCGCCACAGTGAAGAAAGAGTTTGGTGGTGGACACGTCAAAGATGAGATGTTTGGCACAGTTGAGGAGGACATCTGTCTCCAGGGGTATCTGCGACACATCACTTCATGCTCAGCACCAGCGCCTCTGACAGTGGCTGAACAGGAGCTTCAGAGAATCAAAATCACAGAGGGCAGAGTTAAACAGGTGAGTCCTGTATCAGTGTGGACCCCAAACATCAGACTCTACAGGGTCTTGCTTTTCCATTACAGGCTGAAGCCAAACGTGCTTTAAAGCAGCTCGCAGAGAGACGCATCAACTACATTCAACTG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000132172

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00062980 lncRNA upstream 361481 41096173 ~ 41102304 (+) False XLOC_032246
TCONS_00064922 lncRNA upstream 380800 41080510 ~ 41082985 (+) True XLOC_032245
TCONS_00064921 lncRNA upstream 477650 40984597 ~ 40986135 (+) True XLOC_032242
TCONS_00062966 lncRNA upstream 622884 40837650 ~ 40840901 (+) True XLOC_032238
TCONS_00062958 lncRNA upstream 799468 40662533 ~ 40664317 (+) True XLOC_032232
TCONS_00063001 lncRNA downstream 11645 41505115 ~ 41505986 (+) True XLOC_032258
TCONS_00063004 lncRNA downstream 140599 41634069 ~ 41648856 (+) False XLOC_032259
TCONS_00063005 lncRNA downstream 140709 41634179 ~ 41670341 (+) False XLOC_032259
TCONS_00063006 lncRNA downstream 197624 41691094 ~ 41710148 (+) True XLOC_032259
TCONS_00064923 lncRNA downstream 272168 41765638 ~ 41773554 (+) False XLOC_032260
TCONS_00062994 mRNA upstream 2395 41452979 ~ 41461390 (+) True XLOC_032255
TCONS_00062991 mRNA upstream 11941 41446541 ~ 41451844 (+) False XLOC_032254
TCONS_00062992 mRNA upstream 12292 41446550 ~ 41451493 (+) False XLOC_032254
TCONS_00062993 mRNA upstream 12476 41446607 ~ 41451309 (+) True XLOC_032254
TCONS_00062990 mRNA upstream 17732 41255603 ~ 41446053 (+) True XLOC_032253
TCONS_00062998 mRNA downstream 10384 41503854 ~ 41506112 (+) False XLOC_032258
TCONS_00062999 mRNA downstream 10501 41503971 ~ 41505239 (+) False XLOC_032258
TCONS_00063000 mRNA downstream 10650 41504120 ~ 41506749 (+) False XLOC_032258
TCONS_00063002 mRNA downstream 61324 41554794 ~ 41755753 (+) False XLOC_032259
TCONS_00063003 mRNA downstream 61777 41555247 ~ 41757181 (+) False XLOC_032259
TCONS_00062995 other upstream 8912 41454791 ~ 41454873 (+) True XLOC_032256
TCONS_00062987 other upstream 268984 41194687 ~ 41194801 (+) True XLOC_032251
TCONS_00062945 other upstream 916810 40545865 ~ 40546975 (+) False XLOC_032225
TCONS_00062936 other upstream 1414340 40043615 ~ 40049445 (+) True XLOC_032217
TCONS_00062919 other upstream 2091910 39370620 ~ 39371875 (+) True XLOC_032204
TCONS_00063008 other downstream 359902 41853372 ~ 41869189 (+) True XLOC_032262
TCONS_00063013 other downstream 504493 41997963 ~ 41998096 (+) True XLOC_032265
TCONS_00063014 other downstream 669180 42162650 ~ 42162774 (+) True XLOC_032266
TCONS_00063021 other downstream 1125432 42618902 ~ 42622652 (+) True XLOC_032272
TCONS_00063022 other downstream 1142490 42635960 ~ 42643033 (+) True XLOC_032273

Expression Profile


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