Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062998 |
| length | 1038 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 3 |
| gene id | XLOC_032258 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 41503854 ~ 41506749 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0046854 | phosphatidylinositol phosphorylation | biological_process |
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:1903707 | negative regulation of hemopoiesis | biological_process |
| GO:0016567 | protein ubiquitination | biological_process |
| GO:0045620 | negative regulation of lymphocyte differentiation | biological_process |
| GO:0046426 | negative regulation of receptor signaling pathway via JAK-STAT | biological_process |
| GO:0045638 | negative regulation of myeloid cell differentiation | biological_process |
| GO:0045647 | negative regulation of erythrocyte differentiation | biological_process |
| GO:0005942 | phosphatidylinositol 3-kinase complex | cellular_component |
| GO:0046935 | 1-phosphatidylinositol-3-kinase regulator activity | molecular_function |
| id | description |
|---|---|
| ko04630 | JAK-STAT signaling pathway |
| ko04917 | Prolactin signaling pathway |
| ko04121 | Ubiquitin system |
| id | description |
|---|---|
| ZDB-GENE-050907-1 | Predicted to enable 1-phosphatidylinositol-3-kinase regulator activity. Acts upstream of or within negative regulation of erythrocyte differentiation; negative regulation of lymphocyte differentiation; and negative regulation of receptor signaling pathway via JAK-STAT. Predicted to be part of phosphatidylinositol 3-kinase complex. Is expressed in blastomere; pronephric duct; thymus; and ventral wall of dorsal aorta. Human ortholog(s) of this gene implicated in malaria and tuberculosis. Orthologous to human CISH (cytokine inducible SH2 containing protein). |
| ensembl_id | ENSDART00000136538 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00062980 | lncRNA | upstream | 401550 | 41096173 ~ 41102304 (+) | False | XLOC_032246 |
| TCONS_00064922 | lncRNA | upstream | 420869 | 41080510 ~ 41082985 (+) | True | XLOC_032245 |
| TCONS_00064921 | lncRNA | upstream | 517719 | 40984597 ~ 40986135 (+) | True | XLOC_032242 |
| TCONS_00062966 | lncRNA | upstream | 662953 | 40837650 ~ 40840901 (+) | True | XLOC_032238 |
| TCONS_00062958 | lncRNA | upstream | 839537 | 40662533 ~ 40664317 (+) | True | XLOC_032232 |
| TCONS_00063004 | lncRNA | downstream | 127957 | 41634069 ~ 41648856 (+) | False | XLOC_032259 |
| TCONS_00063005 | lncRNA | downstream | 128067 | 41634179 ~ 41670341 (+) | False | XLOC_032259 |
| TCONS_00063006 | lncRNA | downstream | 184982 | 41691094 ~ 41710148 (+) | True | XLOC_032259 |
| TCONS_00064923 | lncRNA | downstream | 259526 | 41765638 ~ 41773554 (+) | False | XLOC_032260 |
| TCONS_00064925 | lncRNA | downstream | 259574 | 41765686 ~ 41773554 (+) | False | XLOC_032260 |
| TCONS_00062997 | mRNA | upstream | 2088 | 41463786 ~ 41501766 (+) | True | XLOC_032257 |
| TCONS_00062994 | mRNA | upstream | 42464 | 41452979 ~ 41461390 (+) | True | XLOC_032255 |
| TCONS_00062991 | mRNA | upstream | 52010 | 41446541 ~ 41451844 (+) | False | XLOC_032254 |
| TCONS_00062992 | mRNA | upstream | 52361 | 41446550 ~ 41451493 (+) | False | XLOC_032254 |
| TCONS_00062993 | mRNA | upstream | 52545 | 41446607 ~ 41451309 (+) | True | XLOC_032254 |
| TCONS_00063002 | mRNA | downstream | 48682 | 41554794 ~ 41755753 (+) | False | XLOC_032259 |
| TCONS_00063003 | mRNA | downstream | 49135 | 41555247 ~ 41757181 (+) | False | XLOC_032259 |
| TCONS_00063007 | mRNA | downstream | 302561 | 41808673 ~ 41887398 (+) | False | XLOC_032262 |
| TCONS_00063011 | mRNA | downstream | 450243 | 41956355 ~ 41974205 (+) | False | XLOC_032264 |
| TCONS_00063012 | mRNA | downstream | 451168 | 41957280 ~ 41974205 (+) | True | XLOC_032264 |
| TCONS_00062996 | other | upstream | 10384 | 41463785 ~ 41493470 (+) | False | XLOC_032257 |
| TCONS_00062995 | other | upstream | 48981 | 41454791 ~ 41454873 (+) | True | XLOC_032256 |
| TCONS_00062987 | other | upstream | 309053 | 41194687 ~ 41194801 (+) | True | XLOC_032251 |
| TCONS_00062945 | other | upstream | 956879 | 40545865 ~ 40546975 (+) | False | XLOC_032225 |
| TCONS_00062936 | other | upstream | 1454409 | 40043615 ~ 40049445 (+) | True | XLOC_032217 |
| TCONS_00063008 | other | downstream | 347260 | 41853372 ~ 41869189 (+) | True | XLOC_032262 |
| TCONS_00063013 | other | downstream | 491851 | 41997963 ~ 41998096 (+) | True | XLOC_032265 |
| TCONS_00063014 | other | downstream | 656538 | 42162650 ~ 42162774 (+) | True | XLOC_032266 |
| TCONS_00063021 | other | downstream | 1112790 | 42618902 ~ 42622652 (+) | True | XLOC_032272 |
| TCONS_00063022 | other | downstream | 1129848 | 42635960 ~ 42643033 (+) | True | XLOC_032273 |
