RNA id: TCONS_00063016


Basic Information

Item Value
RNA id TCONS_00063016
length 167
lncRNA type antisense
GC content 0.47
exon number 2
gene id XLOC_032268
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 42383194 ~ 42383446 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAGACGAAGATTGTAGCGATGAGGTTCATGAGGTTGGGCAGGTTCTGTCTGTAAAAGGCTTCTCTTAGAGCTCGCACTTTATCAGTACGAGTGGCCAATAGGTGAAAGAGAGCAATGATGGCTCCTTCAAACTCCGTACCTcttcctgtgttgactgttgttgGGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000163378

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00063010 lncRNA upstream 468181 41909373 ~ 41915013 (+) True XLOC_032263
TCONS_00063009 lncRNA upstream 472724 41909373 ~ 41910470 (+) False XLOC_032263
TCONS_00064680 lncRNA upstream 472787 41896384 ~ 41910407 (+) False XLOC_032263
TCONS_00064927 lncRNA upstream 594780 41779149 ~ 41788414 (+) False XLOC_032261
TCONS_00064928 lncRNA upstream 599907 41780484 ~ 41783287 (+) True XLOC_032261
TCONS_00063020 lncRNA downstream 220795 42604241 ~ 42610935 (+) False XLOC_032271
TCONS_00064929 lncRNA downstream 225096 42608542 ~ 42610935 (+) True XLOC_032271
TCONS_00064931 lncRNA downstream 273267 42656713 ~ 42666008 (+) False XLOC_032275
TCONS_00064930 lncRNA downstream 273267 42656713 ~ 42666008 (+) False XLOC_032275
TCONS_00063024 lncRNA downstream 273276 42656722 ~ 42666008 (+) False XLOC_032275
TCONS_00063015 mRNA upstream 41975 42338309 ~ 42341219 (+) True XLOC_032267
TCONS_00063011 mRNA upstream 408989 41956355 ~ 41974205 (+) False XLOC_032264
TCONS_00063012 mRNA upstream 408989 41957280 ~ 41974205 (+) True XLOC_032264
TCONS_00063007 mRNA upstream 495796 41808673 ~ 41887398 (+) False XLOC_032262
TCONS_00063003 mRNA upstream 626013 41555247 ~ 41757181 (+) False XLOC_032259
TCONS_00063017 mRNA downstream 92284 42475730 ~ 42505007 (+) True XLOC_032269
TCONS_00063018 mRNA downstream 162351 42545797 ~ 42598011 (+) False XLOC_032270
TCONS_00063019 mRNA downstream 204191 42587637 ~ 42598328 (+) True XLOC_032270
TCONS_00063026 mRNA downstream 283248 42666694 ~ 42690736 (+) False XLOC_032276
TCONS_00063029 mRNA downstream 309842 42693288 ~ 42695664 (+) True XLOC_032277
TCONS_00063014 other upstream 220420 42162650 ~ 42162774 (+) True XLOC_032266
TCONS_00063013 other upstream 385098 41997963 ~ 41998096 (+) True XLOC_032265
TCONS_00063008 other upstream 514005 41853372 ~ 41869189 (+) True XLOC_032262
TCONS_00062996 other upstream 889724 41463785 ~ 41493470 (+) False XLOC_032257
TCONS_00062995 other upstream 928321 41454791 ~ 41454873 (+) True XLOC_032256
TCONS_00063021 other downstream 235456 42618902 ~ 42622652 (+) True XLOC_032272
TCONS_00063022 other downstream 252514 42635960 ~ 42643033 (+) True XLOC_032273
TCONS_00063023 other downstream 262965 42646411 ~ 42653425 (+) True XLOC_032274
TCONS_00063027 other downstream 291167 42674613 ~ 42680610 (+) True XLOC_032276
TCONS_00063042 other downstream 1115625 43499071 ~ 43502279 (+) True XLOC_032286

Expression Profile

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