RNA id: TCONS_00063027



Basic Information


Item Value
RNA id TCONS_00063027
length 739
RNA type processed_transcript
GC content 0.46
exon number 6
gene id XLOC_032276
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 42666694 ~ 42690736 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


aggACCAGGATTACAGGAGTGCAGGTGTCCAGGATAAAATCACAAACACTATTGCCATCTCTGGAATTCCTAAAAATGCCACAATGCAGCAGATTCTGGGAGCTTTTGCAGTTCGTGATGGTGTTCCAATGCAGGGCATGAAAATCAAAGATGTGGTGCCAGGGATCTGTTAAGGTTGGTGACAAGACTGCTCTGCTTAAATATGTCCAATCTGACAAAAATGGGAAAGAGCAGCTCCATGAACCACCCACTAAGGCTACACCAGCTAGTGATGATGGTTTGTTACCAAATCCAGTCCCTCCACCAAACAAACAGGAGGAAACCGCTGTCAAGCCTCTACTGGATGCTGCTTCTCAAGGTGTGTGGCAGAGAAGCTCAAACTTGACTCCTGAAGCATGGCAACAGCAAGTGGACCAACAGCAACAACAGCAGGAACTGGAGCAACAACCCACAGAAGAATGGACCAATCAGAGAGCATCACGCCAAAACTTACAGTACTCTGATCCAGTTTTTAAAGAAAGCAAAACAATGATCATTAAGAACATTCTCCCTACCACCACCGTGGAGACCATTCTGAAAGCACTTGATCCATTTGCTTACCTGGATGAGCGCAATGTACGTTTGGTCAAAGGGAAATCACCTGGATCCAAATGCTTCTGCTTTGTTGATATGGATTCACATGAGCATGTGACACGGTTGGTGGAGCTGCTCACAAAGCCTCGGCCAATCATGATTGATG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000153615

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00064931 lncRNA upstream 8605 42656713 ~ 42666008 (+) False XLOC_032275
TCONS_00064930 lncRNA upstream 8605 42656713 ~ 42666008 (+) False XLOC_032275
TCONS_00063024 lncRNA upstream 8605 42656722 ~ 42666008 (+) False XLOC_032275
TCONS_00063025 lncRNA upstream 8605 42656765 ~ 42666008 (+) False XLOC_032275
TCONS_00064932 lncRNA upstream 8605 42657049 ~ 42666008 (+) True XLOC_032275
TCONS_00064933 lncRNA downstream 12012 42692622 ~ 42751759 (+) False XLOC_032277
TCONS_00063028 lncRNA downstream 12415 42693025 ~ 42744089 (+) False XLOC_032277
TCONS_00064934 lncRNA downstream 12415 42693025 ~ 42751759 (+) False XLOC_032277
TCONS_00064935 lncRNA downstream 12537 42693147 ~ 42695949 (+) False XLOC_032277
TCONS_00064936 lncRNA downstream 12537 42693147 ~ 42705338 (+) False XLOC_032277
TCONS_00063019 mRNA upstream 76285 42587637 ~ 42598328 (+) True XLOC_032270
TCONS_00063018 mRNA upstream 76602 42545797 ~ 42598011 (+) False XLOC_032270
TCONS_00063017 mRNA upstream 169606 42475730 ~ 42505007 (+) True XLOC_032269
TCONS_00063015 mRNA upstream 333394 42338309 ~ 42341219 (+) True XLOC_032267
TCONS_00063012 mRNA upstream 700408 41957280 ~ 41974205 (+) True XLOC_032264
TCONS_00063029 mRNA downstream 12678 42693288 ~ 42695664 (+) True XLOC_032277
TCONS_00063030 mRNA downstream 138353 42818963 ~ 42916343 (+) False XLOC_032278
TCONS_00063031 mRNA downstream 138727 42819337 ~ 42915774 (+) False XLOC_032278
TCONS_00063032 mRNA downstream 139618 42820228 ~ 42914497 (+) True XLOC_032278
TCONS_00063033 mRNA downstream 238323 42918933 ~ 42930302 (+) True XLOC_032279
TCONS_00063023 other upstream 21188 42646411 ~ 42653425 (+) True XLOC_032274
TCONS_00063022 other upstream 31580 42635960 ~ 42643033 (+) True XLOC_032273
TCONS_00063021 other upstream 51961 42618902 ~ 42622652 (+) True XLOC_032272
TCONS_00063014 other upstream 511839 42162650 ~ 42162774 (+) True XLOC_032266
TCONS_00063013 other upstream 676517 41997963 ~ 41998096 (+) True XLOC_032265
TCONS_00063042 other downstream 818461 43499071 ~ 43502279 (+) True XLOC_032286
TCONS_00063044 other downstream 1452358 44132968 ~ 44133082 (+) True XLOC_032289
TCONS_00063059 other downstream 2674799 45355409 ~ 45355525 (+) True XLOC_032298
TCONS_00063061 other downstream 2924670 45605280 ~ 45605396 (+) True XLOC_032300
TCONS_00063065 other downstream 3251631 45932241 ~ 45933222 (+) False XLOC_032302

Expression Profile


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