Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00063063 |
| length | 902 |
| lncRNA type | retained_intron |
| GC content | 0.48 |
| exon number | 2 |
| gene id | XLOC_032301 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 45918981 ~ 45929465 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006082 | organic acid metabolic process | biological_process |
| GO:0006098 | pentose-phosphate shunt | biological_process |
| GO:0043436 | oxoacid metabolic process | biological_process |
| GO:0044281 | small molecule metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005975 | carbohydrate metabolic process | biological_process |
| GO:0006006 | glucose metabolic process | biological_process |
| GO:0019752 | carboxylic acid metabolic process | biological_process |
| GO:0017057 | 6-phosphogluconolactonase activity | molecular_function |
| GO:0050661 | NADP binding | molecular_function |
| GO:0004345 | glucose-6-phosphate dehydrogenase activity | molecular_function |
| GO:0048037 | obsolete cofactor binding | molecular_function |
| GO:1901681 | sulfur compound binding | molecular_function |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | molecular_function |
| id | description |
|---|---|
| ko00030 | Pentose phosphate pathway |
| id | description |
|---|---|
| ZDB-GENE-110408-60 | Predicted to enable 6-phosphogluconolactonase activity; NADP binding activity; and glucose-6-phosphate dehydrogenase activity. Predicted to act upstream of or within glucose metabolic process and pentose-phosphate shunt. Human ortholog(s) of this gene implicated in cortisone reductase deficiency; cortisone reductase deficiency 1; and multiple sclerosis. Orthologous to human H6PD (hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase). |
| ensembl_id | ENSDART00000149450 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00064949 | lncRNA | upstream | 835692 | 44987628 ~ 45083289 (+) | False | XLOC_032295 |
| TCONS_00064950 | lncRNA | upstream | 835692 | 44987683 ~ 45083289 (+) | True | XLOC_032295 |
| TCONS_00064682 | lncRNA | upstream | 902144 | 44987628 ~ 45016837 (+) | False | XLOC_032295 |
| TCONS_00064947 | lncRNA | upstream | 1113393 | 44400764 ~ 44805588 (+) | False | XLOC_032292 |
| TCONS_00064681 | lncRNA | upstream | 1121422 | 44721192 ~ 44797559 (+) | True | XLOC_032293 |
| TCONS_00063068 | lncRNA | downstream | 11977 | 45934767 ~ 45936653 (+) | True | XLOC_032303 |
| TCONS_00063070 | lncRNA | downstream | 336030 | 46258820 ~ 46262122 (+) | False | XLOC_032305 |
| TCONS_00063073 | lncRNA | downstream | 386946 | 46309736 ~ 46320528 (+) | True | XLOC_032306 |
| TCONS_00063081 | lncRNA | downstream | 498329 | 46421119 ~ 46425712 (+) | False | XLOC_032309 |
| TCONS_00063082 | lncRNA | downstream | 505088 | 46427878 ~ 46428729 (+) | True | XLOC_032309 |
| TCONS_00063062 | mRNA | upstream | 80878 | 45692026 ~ 45838103 (+) | True | XLOC_032299 |
| TCONS_00063060 | mRNA | upstream | 80895 | 45494227 ~ 45838086 (+) | False | XLOC_032299 |
| TCONS_00063057 | mRNA | upstream | 542223 | 45346808 ~ 45376758 (+) | False | XLOC_032297 |
| TCONS_00063058 | mRNA | upstream | 542223 | 45347219 ~ 45376758 (+) | True | XLOC_032297 |
| TCONS_00063056 | mRNA | upstream | 590071 | 45300746 ~ 45328910 (+) | True | XLOC_032296 |
| TCONS_00063066 | mRNA | downstream | 9486 | 45932276 ~ 45933368 (+) | True | XLOC_032302 |
| TCONS_00063067 | mRNA | downstream | 11892 | 45934682 ~ 45937000 (+) | False | XLOC_032303 |
| TCONS_00063071 | mRNA | downstream | 336076 | 46258866 ~ 46309060 (+) | False | XLOC_032305 |
| TCONS_00063072 | mRNA | downstream | 337160 | 46259950 ~ 46309056 (+) | True | XLOC_032305 |
| TCONS_00063074 | mRNA | downstream | 397903 | 46320693 ~ 46336189 (+) | False | XLOC_032307 |
| TCONS_00063061 | other | upstream | 313585 | 45605280 ~ 45605396 (+) | True | XLOC_032300 |
| TCONS_00063059 | other | upstream | 563456 | 45355409 ~ 45355525 (+) | True | XLOC_032298 |
| TCONS_00063044 | other | upstream | 1785899 | 44132968 ~ 44133082 (+) | True | XLOC_032289 |
| TCONS_00063042 | other | upstream | 2416702 | 43499071 ~ 43502279 (+) | True | XLOC_032286 |
| TCONS_00063027 | other | upstream | 3238371 | 42674613 ~ 42680610 (+) | True | XLOC_032276 |
| TCONS_00063065 | other | downstream | 9451 | 45932241 ~ 45933222 (+) | False | XLOC_032302 |
| TCONS_00063069 | other | downstream | 103056 | 46025846 ~ 46025963 (+) | True | XLOC_032304 |
| TCONS_00063090 | other | downstream | 826716 | 46749506 ~ 46749624 (+) | True | XLOC_032314 |
| TCONS_00063091 | other | downstream | 947394 | 46870184 ~ 46870298 (+) | True | XLOC_032316 |
| TCONS_00063092 | other | downstream | 1355349 | 47278139 ~ 47278257 (+) | True | XLOC_032318 |
