RNA id: TCONS_00006302



Basic Information


Item Value
RNA id TCONS_00006302
length 189
RNA type mRNA
GC content 0.33
exon number 9
gene id XLOC_003194
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 6169312 ~ 6205367 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TTCATTGAGATCGTTGCAATAAACTTCTTATCTGTCACCCTTACTCAATGTTTGCAGAGGAAgaagatacagcttaaacaagatgtaaattgttgcatggTTTTCGAGactcaTATaaaacttaggactaaatTAGTTCTGAAATATTCTTTAAAACTAAGAGGAACTGACtgtaaaatcagacggata

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000187249

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00006298 lncRNA upstream 27990 6136295 ~ 6141322 (+) False XLOC_003192
TCONS_00006289 lncRNA upstream 90105 6076764 ~ 6079207 (+) False XLOC_003190
TCONS_00008529 lncRNA upstream 94529 6070459 ~ 6074783 (+) False XLOC_003189
TCONS_00008530 lncRNA upstream 94529 6072085 ~ 6074783 (+) True XLOC_003189
TCONS_00006286 lncRNA upstream 96231 6070160 ~ 6073081 (+) False XLOC_003189
TCONS_00006303 lncRNA downstream 602 6205969 ~ 6224120 (+) False XLOC_003195
TCONS_00006304 lncRNA downstream 990 6206357 ~ 6220937 (+) False XLOC_003195
TCONS_00008531 lncRNA downstream 8576 6213943 ~ 6223299 (+) False XLOC_003195
TCONS_00008385 lncRNA downstream 8727 6214094 ~ 6224042 (+) True XLOC_003195
TCONS_00006309 lncRNA downstream 117631 6322998 ~ 6324302 (+) True XLOC_003198
TCONS_00006297 mRNA upstream 24154 6136220 ~ 6145158 (+) False XLOC_003192
TCONS_00006296 mRNA upstream 34729 6116503 ~ 6134583 (+) True XLOC_003191
TCONS_00006293 mRNA upstream 35732 6115669 ~ 6133580 (+) False XLOC_003191
TCONS_00006307 mRNA downstream 76280 6281647 ~ 6293709 (+) True XLOC_003196
TCONS_00006308 mRNA downstream 90003 6295370 ~ 6316718 (+) True XLOC_003197
TCONS_00006311 mRNA downstream 169081 6374448 ~ 6378070 (+) True XLOC_003200
TCONS_00006312 mRNA downstream 217007 6422374 ~ 6423160 (+) True XLOC_003201
TCONS_00006313 mRNA downstream 225766 6431133 ~ 6434600 (+) True XLOC_003202
TCONS_00006299 other upstream 24669 6136321 ~ 6144643 (+) True XLOC_003192
TCONS_00006283 other upstream 131759 6034242 ~ 6037553 (+) True XLOC_003188
TCONS_00006273 other upstream 245571 5880575 ~ 5923741 (+) False XLOC_003185
TCONS_00006262 other upstream 637736 5531443 ~ 5531576 (+) True XLOC_003178
TCONS_00006260 other upstream 687428 5481753 ~ 5481884 (+) True XLOC_003176
TCONS_00006305 other downstream 3803 6209170 ~ 6223299 (+) False XLOC_003195
TCONS_00006306 other downstream 4544 6209911 ~ 6223299 (+) False XLOC_003195
TCONS_00006310 other downstream 122611 6327978 ~ 6328093 (+) True XLOC_003199
TCONS_00006329 other downstream 656885 6862252 ~ 6862368 (+) True XLOC_003212
TCONS_00006340 other downstream 944622 7149989 ~ 7150082 (+) False XLOC_003217