RNA id: TCONS_00063732


Basic Information

Item Value
RNA id TCONS_00063732
length 750
RNA type mRNA
GC content 0.57
exon number 6
gene id XLOC_032749
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 17178321 ~ 17179637 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

aggttggaggagattgtccatgtcccacatgggtgaagaaagaggagAAGATACACGGGACTGCACCACTGAGCTTCCTGGTTTTTTGGCTCCTCTGCCTTCACATTTGGCTgattctgcatccacagaccagaggaacagcaagaggaaaaggcagagcagcagccagcaaacactgtccacctcgtccagcagaccagccaaacgctctcgcagagacttgtacctgaagggcccgttgctgggacgaggtggattcggctctgtgtttgctgggatgcgcaggtctgatggactgccagtggccatcaagtaCGTGTCGAAGGACCGGACCCCAGAGCGACTGAAAGTtgatggtcagggtcggctgctgctggaggtggcattgatgacccgtgtcacgtcagctcctgcctgccccagtgtcctgcagctgctggactggtttgaccaTCCCAGgcgctacatcctgatcctggagcgaccggatccttgccaagatctccagagcttctgtgaggagaacggctgtctggatgagcgtcttgcaaagaaagtgctggtgcagctgattgCGGCCCTTAAACACTGCGAGAGCCGTGgcgtcctgcaccgggacgtcaaaccagaaaacctcctgatctccacagagtcccaggacatcaagctgctggacttcggctgtggagatgtgctgaagcgctcggcctacaaatactttgcaggcactcctgcatacgctcctcctga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000153710

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065120 lncRNA downstream 21119 17156614 ~ 17157202 (-) True XLOC_032748
TCONS_00065119 lncRNA downstream 23022 17154903 ~ 17155299 (-) True XLOC_032747
TCONS_00063728 lncRNA downstream 76966 17099672 ~ 17101355 (-) True XLOC_032743
TCONS_00063725 lncRNA downstream 144028 17032975 ~ 17034293 (-) True XLOC_032740
TCONS_00065118 lncRNA downstream 250384 16927535 ~ 16927937 (-) True XLOC_032735
TCONS_00065121 lncRNA upstream 20007 17199644 ~ 17204841 (-) False XLOC_032751
TCONS_00063738 lncRNA upstream 102270 17281907 ~ 17285849 (-) True XLOC_032755
TCONS_00065122 lncRNA upstream 355323 17534960 ~ 17535475 (-) True XLOC_032760
TCONS_00065123 lncRNA upstream 487879 17667516 ~ 17668826 (-) True XLOC_032761
TCONS_00065124 lncRNA upstream 496555 17676192 ~ 17676959 (-) True XLOC_032762
TCONS_00063729 mRNA downstream 66170 17110835 ~ 17112151 (-) True XLOC_032744
TCONS_00063726 mRNA downstream 126205 17050800 ~ 17052116 (-) True XLOC_032741
TCONS_00063723 mRNA downstream 197000 16980025 ~ 16981321 (-) True XLOC_032738
TCONS_00063721 mRNA downstream 230281 16946724 ~ 16948040 (-) True XLOC_032736
TCONS_00063719 mRNA downstream 284009 16893171 ~ 16894312 (-) True XLOC_032730
TCONS_00063734 mRNA upstream 25148 17204785 ~ 17206028 (-) True XLOC_032751
TCONS_00063736 mRNA upstream 85268 17264905 ~ 17266221 (-) True XLOC_032753
TCONS_00063743 mRNA upstream 546151 17725788 ~ 17849786 (-) False XLOC_032763
TCONS_00063746 mRNA upstream 547893 17727530 ~ 17999776 (-) False XLOC_032763
TCONS_00063745 mRNA upstream 547893 17727530 ~ 17999776 (-) False XLOC_032763
TCONS_00063730 other downstream 63566 17114658 ~ 17114755 (-) True XLOC_032745
TCONS_00063727 other downstream 123594 17054631 ~ 17054727 (-) True XLOC_032742
TCONS_00063724 other downstream 194635 16983589 ~ 16983686 (-) True XLOC_032739
TCONS_00063722 other downstream 227729 16950495 ~ 16950592 (-) True XLOC_032737
TCONS_00063720 other downstream 281247 16896978 ~ 16897074 (-) True XLOC_032731
TCONS_00063733 other upstream 2501 17182138 ~ 17182235 (-) True XLOC_032750
TCONS_00063735 other upstream 29124 17208761 ~ 17208858 (-) True XLOC_032752
TCONS_00063737 other upstream 89025 17268662 ~ 17268759 (-) True XLOC_032754
TCONS_00063739 other upstream 175431 17355068 ~ 17355165 (-) True XLOC_032756
TCONS_00063740 other upstream 205395 17385032 ~ 17385129 (-) True XLOC_032757

Expression Profile

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