RNA id: TCONS_00063843


Basic Information

Item Value
RNA id TCONS_00063843
length 2107
RNA type mRNA
GC content 0.39
exon number 7
gene id XLOC_032838
representative False

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 21861087 ~ 21873266 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CGGAAATGAAGCCAACCAACGTGACCTATGAACTCTGTGTATACGAAATGGAGTCCCAGCAGGAAGTGAACCCTGTATTCCTGCAGCAGCTCAGAGAGTTGGACATTCCCGAGGAAGCAGCCAAGCAGgcactcttacacacacagaaTGTGTCTGCCGAAGAGGCCGCAATGTATTACTTTAACAAACTAGAGAATGAGgAAGAGGGTGATGAGGACTTGATGTTCAAAATggtgtttgttgtaaatatggaGCTGTCCATGGGTGTTGGGAAGGTGGCGGCGCAGGTGGGTCACGCTGCAGTGGGTTTGTATCAGGCCTTGCAGGAGAAGAACAGCTGGAGGGAAATGGCCTGGAAATGGGACCATGCTGGGGCTAAGAAGATTGTGTTGCAGGGCACTAACATGGCACATCTTTTGGAGTTGCAGGCTCTTGCCATGAGCCTCAGTCTTCCTACAAAGCTGGTACAGGATGCTGGACTCACACAGGTGGAGCCAGGCTCATGCACTGTGCTGGCCATCATAGGTGAAGAGGAGATGGTGAATAATGTCACAGGAAGTCTGAAACTGCTTTGAGGGAACTGCTGCAACGCTGACGGGGAAAAAAACTCAGATGTACCACAGAAAGAGCAGGGGTCCGAGATTGCCCACAGCAGCATGGTTCGCCGCAAAAGGTGCACTCAGTAATTTTTCTTTCCATTTTGATGACTCATACTGACACCTTGTGACATGGATGCATTTTTATGCAAAGGCAAGTGTTTTCTGTTACTAATACCAAGGAGTGGGCAATATACTGCATACATTAGTATACTGCTAGCAATTTGTCACCCCTTATTACTATTGAAGTTTCCTTTCTATTGTGATTATGCCAATGTTTCCTGCAGTGCTCACTCTCCAGCATCACAACATAAGAAACCATGTTTTACCCCACTCGTGAATGTGAGTTTGCAAGTTTTATTTAACGTGACGTGAAACGGCTGTGTATTGCAAAATAATGGCATGGAAAAGATCTTTTTATTGGTTTTTCTTTAACCATCTGCTTTACAAACTCAACATAACCTGTGATTATATTAGAGTTGACTAACAGATGACTCGAATACGCCTGTCCATTTGATAAATATTCATCCAAATCAATCAAGAGTGACCGTTTTGTTTGGGAGAAACTCGTGTAAGTTGTTTCCAATCCCTGCACGATCAAACAGAGTGAAATACTTTAGGAATAAAAATCATTTGGATTAAACTAAACCATGTCTTATAATTGTGGATGTGGACTCCAAAAAGATTTCAGTATTGTCATGAAATGTTATCAAAACATGTAAAATGGAGAAAAGACTTCTGAACAAAAACACCGTACTTATACAACACTTACCCATGACTGAAAATGTTACTTTATAGCTTAACATAAAAAAACGAGAAGTCATAACCTGTATTGATCAAATTGTGATCAAGCATTAccttatattttcatttaaaaaaaaatgtatattgtgaTGTATATTGATGTGGACATTGTTCTGTTATATTCTTGCTTTGATTGCCCACCCCTTTCAATTTTAAATGTAGAAACGCACAGTAATccgttattatttatttctcaagtAAAACACAGGGTGGAATGTGCATTACTCGCATAAACCTGAGTAGTATTCAAGTGCTATTGTGATTTAAACTTACGTTTTCAATATCCAGATGAATTTTTTTTTCGGAACTGGAAGGAATTACTGAGTGAACCTTGAAACGCCTGCTTAGTTTAACAAACAGACGTGTTGAAAACCTTGCATTTTTAATTCTCCTAATTAGtttaaagaaagaagaaaaaaaaaaaacgactgaaATGATCAAAAGATCCCTGAATTTAGAGGTTTAAAAACCGTTCTCTTAGAGGGAGCTGACAGTGAAATAGCggtgtataaaatgtataatgaATTATAATCACATGTAAGTGTTATGCTTAATGTGCCTGTAGAACCCAAATGTTTTGATGATTGTGAAATCAAATAGCCATTGTCAAAGTAAAATGTAtaacttttgttctttttttattgtgtgaatatattattttgtattgtttacaattaaaCGTACCCAATCCCTTTGTGATGATAAAA

Function

GO:

id name namespace
GO:0005829 cytosol cellular_component
GO:0005739 mitochondrion cellular_component
GO:0004045 aminoacyl-tRNA hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-1852 Predicted to enable aminoacyl-tRNA hydrolase activity. Predicted to be active in cytosol and mitochondrion.

Ensembl:

ensembl_id ENSDART00000151179

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065148 lncRNA downstream 182877 21670190 ~ 21678210 (-) True XLOC_032835
TCONS_00064737 lncRNA downstream 263471 21589412 ~ 21597616 (-) True XLOC_032834
TCONS_00064736 lncRNA downstream 278449 21577860 ~ 21582638 (-) True XLOC_032833
TCONS_00064735 lncRNA downstream 326855 21532305 ~ 21534232 (-) True XLOC_032832
TCONS_00065147 lncRNA downstream 352048 21506893 ~ 21509039 (-) True XLOC_032830
TCONS_00064738 lncRNA upstream 307996 22181262 ~ 22181876 (-) True XLOC_032842
TCONS_00064739 lncRNA upstream 493356 22366622 ~ 22369086 (-) True XLOC_032843
TCONS_00064740 lncRNA upstream 1144787 23018053 ~ 23018480 (-) True XLOC_032846
TCONS_00064741 lncRNA upstream 1234337 23107603 ~ 23117348 (-) True XLOC_032847
TCONS_00064742 lncRNA upstream 1337285 23210551 ~ 23214286 (-) False XLOC_032848
TCONS_00063841 mRNA downstream 30610 21809633 ~ 21830477 (-) True XLOC_032837
TCONS_00063840 mRNA downstream 30682 21809633 ~ 21830405 (-) False XLOC_032837
TCONS_00063839 mRNA downstream 134329 21697128 ~ 21726758 (-) True XLOC_032836
TCONS_00063838 mRNA downstream 182824 21633286 ~ 21678263 (-) False XLOC_032835
TCONS_00063837 mRNA downstream 244428 21588205 ~ 21616659 (-) False XLOC_032834
TCONS_00063845 mRNA upstream 1666 21874932 ~ 21961817 (-) False XLOC_032839
TCONS_00063846 mRNA upstream 1666 21874932 ~ 21988375 (-) True XLOC_032839
TCONS_00063847 mRNA upstream 169861 22043127 ~ 22064158 (-) True XLOC_032840
TCONS_00063848 mRNA upstream 245923 22119189 ~ 22146258 (-) True XLOC_032841
TCONS_00063849 mRNA upstream 478957 22352223 ~ 22369125 (-) False XLOC_032843
TCONS_00063825 other downstream 1213754 20647227 ~ 20647333 (-) True XLOC_032820
TCONS_00063824 other downstream 1396588 20464402 ~ 20464499 (-) True XLOC_032814
TCONS_00063823 other downstream 1451433 20409557 ~ 20409654 (-) True XLOC_032810
TCONS_00063822 other downstream 1523846 20337144 ~ 20337241 (-) True XLOC_032806
TCONS_00063821 other downstream 1561439 20299551 ~ 20299648 (-) True XLOC_032803
TCONS_00063850 other upstream 667716 22540982 ~ 22541076 (-) True XLOC_032844
TCONS_00063855 other upstream 1521577 23394843 ~ 23394899 (-) True XLOC_032849
TCONS_00063859 other upstream 2082108 23955374 ~ 24053616 (-) False XLOC_032853
TCONS_00063876 other upstream 2912561 24785827 ~ 24785943 (-) True XLOC_032864
TCONS_00063877 other upstream 2968904 24842170 ~ 24842286 (-) True XLOC_032865

Expression Profile

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