Item | Value |
---|---|
RNA id | TCONS_00063920 |
length | 539 |
lncRNA type | retained_intron |
GC content | 0.43 |
exon number | 6 |
gene id | XLOC_032897 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007117.7 |
NCBI id | CM002890.2 |
chromosome length | 60270059 |
location | 28970513 ~ 28980829 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0008150 | biological_process | biological_process |
GO:0005737 | cytoplasm | cellular_component |
GO:0055105 | ubiquitin-protein transferase inhibitor activity | molecular_function |
id | description |
---|---|
ZDB-GENE-080723-14 | Predicted to enable ubiquitin-protein transferase inhibitor activity. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in arteriovenous malformation and glomus tumor. Orthologous to human GLMN (glomulin, FKBP associated protein). |
ensembl_id | ENSDART00000148925 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00065163 | lncRNA | downstream | 840440 | 28124381 ~ 28130130 (-) | True | XLOC_032892 |
TCONS_00063913 | lncRNA | downstream | 1015969 | 27938489 ~ 27954601 (-) | True | XLOC_032890 |
TCONS_00065162 | lncRNA | downstream | 1347049 | 27620675 ~ 27623521 (-) | True | XLOC_032887 |
TCONS_00063910 | lncRNA | downstream | 1347271 | 27620675 ~ 27623299 (-) | False | XLOC_032887 |
TCONS_00063909 | lncRNA | downstream | 1347287 | 27620675 ~ 27623283 (-) | False | XLOC_032887 |
TCONS_00063921 | lncRNA | upstream | 3137 | 28975158 ~ 28980829 (-) | True | XLOC_032897 |
TCONS_00065164 | lncRNA | upstream | 11996 | 28984017 ~ 28986397 (-) | True | XLOC_032898 |
TCONS_00063929 | lncRNA | upstream | 72618 | 29044639 ~ 29045293 (-) | False | XLOC_032900 |
TCONS_00063935 | lncRNA | upstream | 183893 | 29155914 ~ 29159888 (-) | True | XLOC_032902 |
TCONS_00063941 | lncRNA | upstream | 363137 | 29335158 ~ 29335942 (-) | True | XLOC_032906 |
TCONS_00063918 | mRNA | downstream | 8910 | 28946041 ~ 28961660 (-) | True | XLOC_032896 |
TCONS_00063917 | mRNA | downstream | 27514 | 28914233 ~ 28943056 (-) | True | XLOC_032895 |
TCONS_00063916 | mRNA | downstream | 625568 | 28339662 ~ 28345002 (-) | True | XLOC_032894 |
TCONS_00063915 | mRNA | downstream | 747978 | 28216487 ~ 28222592 (-) | True | XLOC_032893 |
TCONS_00063914 | mRNA | downstream | 852575 | 28115383 ~ 28117995 (-) | True | XLOC_032891 |
TCONS_00063922 | mRNA | upstream | 32041 | 29004062 ~ 29007493 (-) | True | XLOC_032899 |
TCONS_00063924 | mRNA | upstream | 39890 | 29011911 ~ 29086473 (-) | False | XLOC_032900 |
TCONS_00063925 | mRNA | upstream | 45503 | 29017524 ~ 29049022 (-) | False | XLOC_032900 |
TCONS_00063927 | mRNA | upstream | 47744 | 29019765 ~ 29051788 (-) | False | XLOC_032900 |
TCONS_00063926 | mRNA | upstream | 47744 | 29019765 ~ 29051788 (-) | False | XLOC_032900 |
TCONS_00063903 | other | downstream | 1914707 | 27051342 ~ 27055863 (-) | True | XLOC_032882 |
TCONS_00063901 | other | downstream | 1921588 | 27041747 ~ 27048982 (-) | False | XLOC_032882 |
TCONS_00063885 | other | downstream | 3781787 | 25188023 ~ 25188783 (-) | True | XLOC_032870 |
TCONS_00063877 | other | downstream | 4128284 | 24842170 ~ 24842286 (-) | True | XLOC_032865 |
TCONS_00063876 | other | downstream | 4184627 | 24785827 ~ 24785943 (-) | True | XLOC_032864 |
TCONS_00063923 | other | upstream | 39890 | 29011911 ~ 29084554 (-) | False | XLOC_032900 |
TCONS_00063930 | other | upstream | 72976 | 29044997 ~ 29052872 (-) | False | XLOC_032900 |
TCONS_00063931 | other | upstream | 89629 | 29061650 ~ 29084651 (-) | True | XLOC_032900 |
TCONS_00063938 | other | upstream | 286217 | 29258238 ~ 29274408 (-) | True | XLOC_032904 |
TCONS_00063952 | other | upstream | 1230900 | 30202921 ~ 30203037 (-) | True | XLOC_032918 |