RNA id: TCONS_00063933



Basic Information


Item Value
RNA id TCONS_00063933
length 966
RNA type mRNA
GC content 0.51
exon number 2
gene id XLOC_032901
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 29102942 ~ 29143463 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


ATGGAAGGGATCATTAAGTGCCAGATGAAGGAAGACCCTCATTATGATCTGGGTTTTGAACTGGAGCCCCGAAAAGAGTCTGCCTCCTTCAGCAGGCCAACCAAAGGCACATCAATGCAGAAGTTCAAAGAAATGGTTTTCAACCATCTAAAGGCAAAAGTAGGAGACCAAGCAAACTTAGCAGATCTGTTGACCCTGGTGCTGGGAGTCGCCGACAGCAACAAGGATGGAGAGATTTCACTGTCAGAAGCGCATTCAGCCTGGGCTTTACTGCAGCTCAATGAATTCCTGCTGTCCGTGGTGCTGCAGGAGCGAGAACACACTCCCAGACTGCTGGGCTTCTGCGGGGACCTGTACGTGATGGAGAAGGTGCCTTATGTGCCCCTGTATGGTGTCAGCCTGCCATGGATGGTGGAGCTGTGGATTCCGGCTAGCTTGCGGCGAAGCATCGACCAGTGGGCCACCCCGTCCTGGCCTCGCAAAGCCAAGATCGCCATCGGCCTGTTCGAACTGGTCGAGGACGTCTTCCACGGCACATTCGGGAGTTTCCTCATGTGTGACGTTAGCGCTGCGGGGTTTGGTTATACAGAGCGCCACGATATAAAGGTGGTAGACGCAAGGCAGATTGTGCCTGAAGTTGGTTTTCAGGAAGTGATGCGCGAGAGGCGCTGTGAAGAAGACACTGATTGTTTGTATGGAAGGGACTGCTTTACTTCATGCGATCTTACTAAACACCGCTGCACAACAGAGGTTACACAACCCAATCTGGCTAAAGTATGCAGCACATTGAAGGACTATATTCTGTACGGCGCGCCATCAGACATTAAAGACGAACTGGATAAACAGTTGTACGCTTGCATTGCTCTCAAAGGTGCCAGCGAACAGATGGAAATGGAGCACTCGCTGATTCTCAACAACCTCAAAACTCTTCTTTGGAAGAAGATATCACACACTAAAGACTCCTAG

Function


GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-131126-27 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DIPK1A (divergent protein kinase domain 1A).

Ensembl:

ensembl_id ENSDART00000184355

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00063929 lncRNA downstream 57721 29044639 ~ 29045293 (-) False XLOC_032900
TCONS_00065164 lncRNA downstream 116617 28984017 ~ 28986397 (-) True XLOC_032898
TCONS_00063921 lncRNA downstream 122185 28975158 ~ 28980829 (-) True XLOC_032897
TCONS_00063920 lncRNA downstream 130993 28970570 ~ 28972021 (-) False XLOC_032897
TCONS_00065163 lncRNA downstream 972884 28124381 ~ 28130130 (-) True XLOC_032892
TCONS_00063935 lncRNA upstream 50187 29155914 ~ 29159888 (-) True XLOC_032902
TCONS_00063941 lncRNA upstream 229431 29335158 ~ 29335942 (-) True XLOC_032906
TCONS_00065165 lncRNA upstream 304499 29410226 ~ 29411285 (-) True XLOC_032908
TCONS_00063948 lncRNA upstream 392234 29497961 ~ 29514132 (-) True XLOC_032909
TCONS_00065166 lncRNA upstream 552174 29657901 ~ 29659956 (-) True XLOC_032910
TCONS_00063924 mRNA downstream 16541 29011911 ~ 29086473 (-) False XLOC_032900
TCONS_00063927 mRNA downstream 51226 29019765 ~ 29051788 (-) False XLOC_032900
TCONS_00063926 mRNA downstream 51226 29019765 ~ 29051788 (-) False XLOC_032900
TCONS_00063928 mRNA downstream 51241 29021585 ~ 29051773 (-) False XLOC_032900
TCONS_00063925 mRNA downstream 53992 29017524 ~ 29049022 (-) False XLOC_032900
TCONS_00063934 mRNA upstream 39049 29144776 ~ 29159888 (-) False XLOC_032902
TCONS_00063936 mRNA upstream 78410 29184137 ~ 29195642 (-) True XLOC_032903
TCONS_00063937 mRNA upstream 121762 29227489 ~ 29288155 (-) False XLOC_032904
TCONS_00063939 mRNA upstream 189583 29295310 ~ 29305132 (-) True XLOC_032905
TCONS_00063940 mRNA upstream 207493 29313220 ~ 29377092 (-) False XLOC_032906
TCONS_00063931 other downstream 18363 29061650 ~ 29084651 (-) True XLOC_032900
TCONS_00063923 other downstream 18460 29011911 ~ 29084554 (-) False XLOC_032900
TCONS_00063930 other downstream 50142 29044997 ~ 29052872 (-) False XLOC_032900
TCONS_00063903 other downstream 2047151 27051342 ~ 27055863 (-) True XLOC_032882
TCONS_00063901 other downstream 2054032 27041747 ~ 27048982 (-) False XLOC_032882
TCONS_00063938 other upstream 152511 29258238 ~ 29274408 (-) True XLOC_032904
TCONS_00063952 other upstream 1097194 30202921 ~ 30203037 (-) True XLOC_032918
TCONS_00063998 other upstream 3203961 32309688 ~ 32314874 (-) True XLOC_032941
TCONS_00064000 other upstream 3288775 32394502 ~ 32405841 (-) False XLOC_032943
TCONS_00064015 other upstream 4337607 33443334 ~ 33443455 (-) True XLOC_032953

Expression Profile


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