RNA id: TCONS_00064009


Basic Information

Item Value
RNA id TCONS_00064009
length 2674
RNA type mRNA
GC content 0.44
exon number 14
gene id XLOC_032949
representative False

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 32966750 ~ 33023745 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCGCAGCGCATATCAGGGATCATTGTGAGTCTGCGCGGATAACCGCTCGGCAGCGGAGTGTTTCAACACAATATCGAGAATAGCGAGTTACATTCAGACATCCCTCACCTCAGACCTTGCCGTTTCTCTCTGTGTATCTGCGCTTCTTTTTGATCCATTGCCTTGATTAGACGTCTATAAGTGAGGTAACTGTTCCCTCATTTATCTCAGAGCCAGAGAGgcgtacacacacacaagttgTCCGCAGAAGTTTTTCGGGGCGTCTTGCGGGAATGTTTGTGCAGCAGCGCGCGCCGCAGCACTTCCACCGCCTGTGACTGACAGCGCGAGACAATCTGCATTCTGCATCGGGTTCAAACGTCCTTTCCAGAGACCTCCAGCCGTCTGGGACAaTCCGATAAGAATCCGAAGAACTGCAGCAGTTTTCCAGTGTACCTGTTTACCATCCTGCAGTTTGTTGTTCCTCTCTGCTGCTGCTCATCGGTGGATATAATCGCTTCAGTGCTCCAGACAAAATGGCTTCCACAGTGAGAAAATGTCAGCACCTGTTTTTAGCACTCATCCTTCTTCCTATgATCTACTGCATGCATCCAGACTGTGTCATTCAGTTAGAGAAGGAGAAGTGTATTGAAAGGATGTTCCTGGATGATCCCAACAGTGAACCGGAATTAGTCTGTCGATGGATGTGGGACAACCTTACCTGCTGGCAGCCTGCAAGACTGGGTCAAGTTGTCTGGATGCCCTGTCCTGAACTATTTGAAGTCATGAATGATGAAAATAACGAGTTTGGAAAGGTGAGTCGTAACTGCACTGAATATGGCTGGTCGGAGATGGTCCCACACTACGTTGATGTTTGCCCTTTCAATGAAAATGGAACAAATCCAgatATGTACTATGTGTCAGTAAAGGCTCTGTATACTGTGGGCTACAGCACCTCTCTGGTATCTCTCACCACTGCCATGGTCATCCTCTGCAAGTTCAGGAAGCTACACTGCACCCGGAATTTCATTCATATGAACCTGTTTGTGTCCTTCATCCTGAGGGCCATCTCGGTTTTCATTAAAGATGGCATTTTATATGCAGAGGAGGACAGCAACCATTGCTTTATACACACTGTGGAGTGTAAAGCGGTGATGGTATTTTTTCACTATTGTGTTCTGTCAAATTACTTCTGGCTGTTCATCGAGGGCTTGTATCTCTTTACTTTGCTCGTTGAGACGTTCTTTCCAGAGAAAAGATACTTCTACTGGTATACCATTATTGGATGGGGTACTCCAACAATATGTGTGACTATCTGGGCTGTTTTAAGAGCTCATTTTGATAACATTGGTTGCTGGGATATTAATGACAATGCTACCATCTGGTGGGTGATAAAGGGCCCTGTTCTTGCCTCTATTATGATCAACTTTATACTGTTCATTGGCATCATTATAATCTTGGTGCAGAAGCTGCAGTCTCCAGACATCGGAGGGAACGAGTCCAGCATTTATCTGCGTCTGGCTCGCTCCACTCTGCTCCTCATTCCCCTGTTTGGCATCCACTACACTGTCTTTGCTTTTACTCCAGAAGATGTTAGTAAGAGAGAAAGGCTGGTGTTTGAGCTCGGTCTTGGGTCTTTTCAGGGTTTTGTTGTAGCTGTCCTTTACTGCTTCCTTAATGGAGAGGTGCAGTCCGAAATCAAGCGAAAGTGGCGCAGCTGGACGGTGAACCGCTACTTTGCGGTGGACATGAAGCACAGACACCCTTCTCTGGCCAGCAGTGGAGTCAACGGGGGAACACAGCTCTCCATCCTCAGCAAAAGCAGCTCGCAAATCCGCATGTCCAGCCTTCAAGCCGAAACACCGGCTACGTGAGCGCTCAGACCCACAAACTGAAGGCCAAACACCTCAGAGCGACATCCCATAATCTACAGTGCGTCAACAACATACAAATCCTGTTTCATCTTCGTTTGAGGTCCGTATCGTGTCGGTTAAAGTTGTAATATCTGGCAACCGTCAGCTGTATTATCTGGCAATCGCCAATAGATGGCAGGATTTCGCTGTGAGAAATCAGAGGAGGTCGCAAACGGTGTTGTATTTTGATATGAACCGAAAGGAATTACTTACGAAGGAAACAAAAATTCCGAATCTGTAACTGTGAGGTGTTTAGGATGCAGTTTTTGTACATATAAAAAAGTCTGTcacgttttctttttttctgtatgtGAAGAATTGTGAAGATTTCGCATTAGTTCGTTGTCATACAGAAGCGGTTGGTCTGAATGAAGACAGCATCAAGTGGAAAGAGTCATTTTTGAAAGGAGAAGAAATAACATTTTTGGCCCACAGGAGCTTAATGAACTGATTTCCTGTTCCTAAGATGAATTTAATATTGAAtgaatgttaatgttaatgttaaatgtTATGAATGTAAATAGTTTATTATGTTGTAAATGTATATTGAAGAGAATGCAGAGAAAGGACAATGAAGATGtttagtaaatgttgaagtccTGGGACTTAGGCCTACAGTATTTCCCGAACTGGCATTTGAAACCTCTTTAaaagaataacttttttttactgAGTGAATTCCTCTTCTATTTCTTTTGGttacatattatatttttaaatagccGTTGGTACAGAAAATGTCAATTAGAATATAACAAAGCAGTAAACACGTGCCACATAC

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0043005 neuron projection cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0017046 peptide hormone binding molecular_function
GO:0008528 G protein-coupled peptide receptor activity molecular_function
GO:0004888 transmembrane signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004999 vasoactive intestinal polypeptide receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050315-1 Predicted to enable G protein-coupled peptide receptor activity and peptide hormone binding activity. Acts upstream of or within adenylate cyclase-modulating G protein-coupled receptor signaling pathway and phospholipase C-activating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection and plasma membrane. Is expressed in several structures, including central nervous system; eye; gut; heart; and pleuroperitoneal region. Orthologous to human ADCYAP1R1 (ADCYAP receptor type I).

Ensembl:

ensembl_id ENSDART00000156211

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00064008 lncRNA downstream 135100 32829516 ~ 32831650 (-) True XLOC_032948
TCONS_00064748 lncRNA downstream 279364 32687002 ~ 32687386 (-) True XLOC_032946
TCONS_00064004 lncRNA downstream 373958 32573996 ~ 32592792 (-) True XLOC_032945
TCONS_00065181 lncRNA downstream 549997 32415076 ~ 32416753 (-) True XLOC_032944
TCONS_00064003 lncRNA downstream 550018 32415076 ~ 32416732 (-) False XLOC_032944
TCONS_00065182 lncRNA upstream 95096 33118841 ~ 33129263 (-) True XLOC_032951
TCONS_00065183 lncRNA upstream 166837 33190582 ~ 33210388 (-) True XLOC_032952
TCONS_00064028 lncRNA upstream 889131 33912876 ~ 33915570 (-) False XLOC_032957
TCONS_00064029 lncRNA upstream 889131 33912876 ~ 33916720 (-) False XLOC_032957
TCONS_00065184 lncRNA upstream 889131 33912876 ~ 33916722 (-) False XLOC_032957
TCONS_00064006 mRNA downstream 132365 32717438 ~ 32834385 (-) False XLOC_032948
TCONS_00064007 mRNA downstream 239902 32717647 ~ 32726848 (-) False XLOC_032948
TCONS_00064005 mRNA downstream 263433 32699359 ~ 32703317 (-) True XLOC_032947
TCONS_00064001 mRNA downstream 555023 32404671 ~ 32411727 (-) False XLOC_032943
TCONS_00064002 mRNA downstream 555047 32409112 ~ 32411703 (-) True XLOC_032943
TCONS_00064012 mRNA upstream 47021 33070766 ~ 33075576 (-) True XLOC_032950
TCONS_00064013 mRNA upstream 80799 33104544 ~ 33129312 (-) False XLOC_032951
TCONS_00064014 mRNA upstream 81885 33105630 ~ 33129045 (-) False XLOC_032951
TCONS_00064016 mRNA upstream 639921 33663666 ~ 33871055 (-) False XLOC_032954
TCONS_00064017 mRNA upstream 644828 33668573 ~ 33685325 (-) False XLOC_032954
TCONS_00064000 other downstream 560909 32394502 ~ 32405841 (-) False XLOC_032943
TCONS_00063998 other downstream 651876 32309688 ~ 32314874 (-) True XLOC_032941
TCONS_00063952 other downstream 2763713 30202921 ~ 30203037 (-) True XLOC_032918
TCONS_00063938 other downstream 3692342 29258238 ~ 29274408 (-) True XLOC_032904
TCONS_00063931 other downstream 3882099 29061650 ~ 29084651 (-) True XLOC_032900
TCONS_00064015 other upstream 419589 33443334 ~ 33443455 (-) True XLOC_032953
TCONS_00064019 other upstream 654632 33678377 ~ 33681084 (-) True XLOC_032954
TCONS_00064020 other upstream 702302 33726047 ~ 33726148 (-) True XLOC_032955
TCONS_00064023 other upstream 887409 33911154 ~ 33916702 (-) False XLOC_032957
TCONS_00064026 other upstream 888444 33912189 ~ 33916660 (-) False XLOC_032957

Expression Profile

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