RNA id: TCONS_00064013


Basic Information

Item Value
RNA id TCONS_00064013
length 1935
RNA type mRNA
GC content 0.37
exon number 8
gene id XLOC_032951
representative False

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 33104544 ~ 33129312 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CGTGTCtcctttactttattttaatctcTCTTCAGTGTTTTCCCCTGTATATTGCTCATTTGCCAACTCACTCCACAGAGTTTAGATCTATTACTGCACTTTGGATCAAAACAGATTAAAATGGGCTGCTTCACATTTGTCAAAGCTCTGATGGTCATGTTCAACTTGCTTATCTGCCTGGCGGGCATATGTGTGGCTACCGTAGGGATATGGGCGACTGTGTATGAAAACTCCTTTATGAACATTTTACCACCCTTTAATGACAAGATCTGGAGTCACGTCAATGTGGGAATCTTCTGCATCTGTATTGGCGCAGTCATGACATGGCTTGGTATGATTGGATGTTGTGGAGCTCAAAAAGAGAGCAAATGCCTTCTTATAATGTTCTTCTCCATCGTCCTGATCATTTGCATTGCTGAGGTGGCAGCTGCAGTAGTAACCCTGGTCTACTCCTCATACGCTGAGATCTTTCTAAGATTGTGGGCCATACCTGGACTGAAGGAGCAGTATGGCAAAAATCAAATCTTCACAAACTTGTGGAATTCAACCATGACCACATTGCAATGCTGTGGCTTTAACAACTACACCGACTTCTCTGGATCCTATTACTATATGCAGAATGGAGAACTTTACCCTCCTGCTTGTTGTTTAGGTCTTGAGCTCTTCCCCTGTGATGAGGACAATGCAGATTACAGCAGAGTTATGGGCTGCTTTAAACGAATTGTTAAGAACACCAAAATGAATGTCAACATTGTAGGAGGAATAGCTGCTGGAGTCACTGCCATTGAGTTGGCTGCGATGGGAGTGGCTATGTATCTCTATTGCTACCTGGACAAAAAAGAAACCTGAAAGTCTTACTAGAAttatgaatgcattttttttgtttatgattCAAAGTAGGGAAGCGATACTGTAGATGTTATGAAATTAATTGTTGATTAGATGAAAAGATTTAATTTGTACGATTTTAACAAGGCAAAGTGGATGATAAAATTGTTATTTGATTTTGAAAAGGaatgtgatgtaaaaaaaaaaaataattattttctttctgtgtATGCAATGCAATGCCTCAATTCTTTTTATAACCATAAATCCAGttcatttgcattgaaatacaatAATTGTTTTGCACTGAAACGCTTCATCCCACACAAGCTGTTCTAATACATGAAAAATTCGTTTAGggagcagaaaaaaagtgttggCTTAGATTATGtcataaataatgcataaataactTTGCACCATACAAAAATATAGCTACTTTCAGTATGTTATATTTGGTGAATGAGAGAGGTTGATCATTTGCTTTTTTTGGTATGTACagtaaataaaatgcaacatGATGTGAAGTCAATCCAGTTTCTCCTTGTAATGACTTTGACAGTGTagatcaaaataaatgaatgaagaggTGGAAATAATATTCATGCACAAACATTGTAACTCACTCTACTAAAACACTCTCTCTGGTGGTCTGCATCATTATGAAATTCCCACTACAACTCCAGCACACACAGTCAAATCACATTTACACAGGGCTTAAACCACACTAAATTTGCATTGATTTCAATATTCACACAATTTCCTTTGCGGCTTCTTCAGGTTTCCACATAGTTTGCCTGCCCTGTTGTCTACTTATCTAAaagaaaattattatgtttataacATTAGATATCATTCTATTGAGAAAAACGAAAACTAGGGCTAAATGATCATTTTAGCACTGAAATCACAATTGTACACAtttacaatagtcacattgcaggatgtgCAATATTGAGTTTATATGGTGGGATTACAATTTACCAGAAGCTACAGTTcagaaaacagagcatttttggatTCACTGAAATGTTTAACCATAATGGAGTGAAAGTTgatgatttgcatgtgtttttaaggccagTGACTGTGTAAGCATTCAGGCAC

Function

GO: NA

KEGG:

id description
ko04147 Exosome

Ensembl:

ensembl_id ENSDART00000156987

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00064010 lncRNA downstream 134930 32967396 ~ 32969614 (-) False XLOC_032949
TCONS_00064008 lncRNA downstream 272894 32829516 ~ 32831650 (-) True XLOC_032948
TCONS_00064748 lncRNA downstream 417158 32687002 ~ 32687386 (-) True XLOC_032946
TCONS_00064004 lncRNA downstream 511752 32573996 ~ 32592792 (-) True XLOC_032945
TCONS_00065181 lncRNA downstream 687791 32415076 ~ 32416753 (-) True XLOC_032944
TCONS_00065183 lncRNA upstream 61270 33190582 ~ 33210388 (-) True XLOC_032952
TCONS_00064028 lncRNA upstream 783564 33912876 ~ 33915570 (-) False XLOC_032957
TCONS_00064029 lncRNA upstream 783564 33912876 ~ 33916720 (-) False XLOC_032957
TCONS_00065184 lncRNA upstream 783564 33912876 ~ 33916722 (-) False XLOC_032957
TCONS_00064034 lncRNA upstream 789501 33918813 ~ 33921694 (-) False XLOC_032958
TCONS_00064012 mRNA downstream 28968 33070766 ~ 33075576 (-) True XLOC_032950
TCONS_00064009 mRNA downstream 80799 32966750 ~ 33023745 (-) False XLOC_032949
TCONS_00064011 mRNA downstream 104898 32967570 ~ 32999646 (-) True XLOC_032949
TCONS_00064006 mRNA downstream 270159 32717438 ~ 32834385 (-) False XLOC_032948
TCONS_00064007 mRNA downstream 377696 32717647 ~ 32726848 (-) False XLOC_032948
TCONS_00064016 mRNA upstream 534354 33663666 ~ 33871055 (-) False XLOC_032954
TCONS_00064017 mRNA upstream 539261 33668573 ~ 33685325 (-) False XLOC_032954
TCONS_00064018 mRNA upstream 544777 33674089 ~ 33707278 (-) False XLOC_032954
TCONS_00064021 mRNA upstream 745825 33875137 ~ 33878665 (-) False XLOC_032956
TCONS_00064022 mRNA upstream 745980 33875292 ~ 33875919 (-) True XLOC_032956
TCONS_00064000 other downstream 698703 32394502 ~ 32405841 (-) False XLOC_032943
TCONS_00063998 other downstream 789670 32309688 ~ 32314874 (-) True XLOC_032941
TCONS_00063952 other downstream 2901507 30202921 ~ 30203037 (-) True XLOC_032918
TCONS_00063938 other downstream 3830136 29258238 ~ 29274408 (-) True XLOC_032904
TCONS_00063931 other downstream 4019893 29061650 ~ 29084651 (-) True XLOC_032900
TCONS_00064015 other upstream 314022 33443334 ~ 33443455 (-) True XLOC_032953
TCONS_00064019 other upstream 549065 33678377 ~ 33681084 (-) True XLOC_032954
TCONS_00064020 other upstream 596735 33726047 ~ 33726148 (-) True XLOC_032955
TCONS_00064023 other upstream 781842 33911154 ~ 33916702 (-) False XLOC_032957
TCONS_00064026 other upstream 782877 33912189 ~ 33916660 (-) False XLOC_032957

Expression Profile

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