RNA id: TCONS_00064022


Basic Information

Item Value
RNA id TCONS_00064022
length 628
RNA type mRNA
GC content 0.45
exon number 1
gene id XLOC_032956
representative True

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 33875137 ~ 33878665 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAGTCATTCCACTGGTCGGTCCACAGACTCAAGAAACAACCTCAAGGAGAAGAGAGTCCACCAAGAGAACTTGATTTACTCCGTTACGACATGAAACACCTAAAGAATGCTCCCAAACCAGCTCTCTATCTGGGATTAGCTGGACTCATACCTTTTGTATCTGCTCCTCTGCTAATGGCTGTCACAGAGCTGTATTACTCTGATGTTGCGTTTGCTCAGGTTGCATATGGAGCATCCATTGTTTCCTTTCTTGGTGGGATTCGCTGGGGTTTTGCCTTGCCTGCAGGAAGTCCTGAAAAACCTGACTGGCTCAATTTGGCCAACAGCGTGGTTCCCTCCCTGATTGCTTGGACGGCGCTTCTTTTCCAGCATGACATTACATCTTCTGCTATGATTGTAATAATAGGGCTCGGGATAGCATTGCATTATGACCTGTCCCTCCTGCCCACTTACCCCAGCTGGTTTAAAGCGTTGAGGGCAATACTCACAATTGTAGCCTTTTTGTCCTTGCTGGGTACTCTTATCATTAAGCAGGTTTATCCTGAGAAGAAGTTTATAAgggattaaattatttatttgtgatgTCAGTATTGTGTTAAAAGTACGTGCATCATATCTGTTTCCATTG

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081022-98 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM69 (transmembrane protein 69).

Ensembl:

ensembl_id ENSDART00000190411

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065183 lncRNA downstream 664904 33190582 ~ 33210388 (-) True XLOC_032952
TCONS_00065182 lncRNA downstream 746029 33118841 ~ 33129263 (-) True XLOC_032951
TCONS_00064010 lncRNA downstream 905678 32967396 ~ 32969614 (-) False XLOC_032949
TCONS_00064008 lncRNA downstream 1043642 32829516 ~ 32831650 (-) True XLOC_032948
TCONS_00064748 lncRNA downstream 1187906 32687002 ~ 32687386 (-) True XLOC_032946
TCONS_00064028 lncRNA upstream 36957 33912876 ~ 33915570 (-) False XLOC_032957
TCONS_00064029 lncRNA upstream 36957 33912876 ~ 33916720 (-) False XLOC_032957
TCONS_00065184 lncRNA upstream 36957 33912876 ~ 33916722 (-) False XLOC_032957
TCONS_00064034 lncRNA upstream 42894 33918813 ~ 33921694 (-) False XLOC_032958
TCONS_00065185 lncRNA upstream 107951 33983870 ~ 33984665 (-) True XLOC_032960
TCONS_00064016 mRNA downstream 4237 33663666 ~ 33871055 (-) False XLOC_032954
TCONS_00064018 mRNA downstream 168014 33674089 ~ 33707278 (-) False XLOC_032954
TCONS_00064017 mRNA downstream 189967 33668573 ~ 33685325 (-) False XLOC_032954
TCONS_00064013 mRNA downstream 745980 33104544 ~ 33129312 (-) False XLOC_032951
TCONS_00064014 mRNA downstream 746247 33105630 ~ 33129045 (-) False XLOC_032951
TCONS_00064024 mRNA upstream 35235 33911154 ~ 33916788 (-) False XLOC_032957
TCONS_00064025 mRNA upstream 35236 33911155 ~ 33913184 (-) False XLOC_032957
TCONS_00064027 mRNA upstream 36422 33912341 ~ 33916756 (-) False XLOC_032957
TCONS_00064035 mRNA upstream 42894 33918813 ~ 33925409 (-) False XLOC_032958
TCONS_00064036 mRNA upstream 45161 33921080 ~ 33925381 (-) False XLOC_032958
TCONS_00064020 other downstream 149144 33726047 ~ 33726148 (-) True XLOC_032955
TCONS_00064019 other downstream 194208 33678377 ~ 33681084 (-) True XLOC_032954
TCONS_00064015 other downstream 431837 33443334 ~ 33443455 (-) True XLOC_032953
TCONS_00064000 other downstream 1469451 32394502 ~ 32405841 (-) False XLOC_032943
TCONS_00063998 other downstream 1560418 32309688 ~ 32314874 (-) True XLOC_032941
TCONS_00064023 other upstream 35235 33911154 ~ 33916702 (-) False XLOC_032957
TCONS_00064026 other upstream 36270 33912189 ~ 33916660 (-) False XLOC_032957
TCONS_00064030 other upstream 37268 33913187 ~ 33916714 (-) False XLOC_032957
TCONS_00064031 other upstream 37447 33913366 ~ 33916722 (-) False XLOC_032957
TCONS_00064032 other upstream 37876 33913795 ~ 33916713 (-) False XLOC_032957

Expression Profile

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