Item | Value |
---|---|
RNA id | TCONS_00064033 |
length | 643 |
RNA type | processed_transcript |
GC content | 0.46 |
exon number | 6 |
gene id | XLOC_032957 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007117.7 |
NCBI id | CM002890.2 |
chromosome length | 60270059 |
location | 33911154 ~ 33916788 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006335 | DNA replication-dependent nucleosome assembly | biological_process |
GO:0034080 | CENP-A containing nucleosome assembly | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0005654 | nucleoplasm | cellular_component |
GO:0042393 | histone binding | molecular_function |
id | description |
---|---|
ko03036 | Chromosome and associated proteins |
id | description |
---|---|
ZDB-GENE-030131-5511 | Predicted to enable histone binding activity. Predicted to be involved in CENP-A containing nucleosome assembly and DNA replication-dependent nucleosome assembly. Predicted to be located in nucleus. Predicted to be active in nucleoplasm. Is expressed in several structures, including eye; immature eye; pectoral fin; pharyngeal arch; and ventricular zone. Orthologous to human NASP (nuclear autoantigenic sperm protein). |
ensembl_id | ENSDART00000137238 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00065183 | lncRNA | downstream | 703815 | 33190582 ~ 33210388 (-) | True | XLOC_032952 |
TCONS_00065182 | lncRNA | downstream | 784940 | 33118841 ~ 33129263 (-) | True | XLOC_032951 |
TCONS_00064010 | lncRNA | downstream | 944589 | 32967396 ~ 32969614 (-) | False | XLOC_032949 |
TCONS_00064008 | lncRNA | downstream | 1082553 | 32829516 ~ 32831650 (-) | True | XLOC_032948 |
TCONS_00064748 | lncRNA | downstream | 1226817 | 32687002 ~ 32687386 (-) | True | XLOC_032946 |
TCONS_00064034 | lncRNA | upstream | 2649 | 33918813 ~ 33921694 (-) | False | XLOC_032958 |
TCONS_00065185 | lncRNA | upstream | 67706 | 33983870 ~ 33984665 (-) | True | XLOC_032960 |
TCONS_00065186 | lncRNA | upstream | 242453 | 34158617 ~ 34177898 (-) | True | XLOC_032962 |
TCONS_00065187 | lncRNA | upstream | 733631 | 34649795 ~ 34652139 (-) | True | XLOC_032965 |
TCONS_00064749 | lncRNA | upstream | 901019 | 34817183 ~ 34818189 (-) | True | XLOC_032966 |
TCONS_00064025 | mRNA | downstream | 1019 | 33911155 ~ 33913184 (-) | False | XLOC_032957 |
TCONS_00064021 | mRNA | downstream | 35538 | 33875137 ~ 33878665 (-) | False | XLOC_032956 |
TCONS_00064022 | mRNA | downstream | 38284 | 33875292 ~ 33875919 (-) | True | XLOC_032956 |
TCONS_00064018 | mRNA | downstream | 206925 | 33674089 ~ 33707278 (-) | False | XLOC_032954 |
TCONS_00064017 | mRNA | downstream | 228878 | 33668573 ~ 33685325 (-) | False | XLOC_032954 |
TCONS_00064035 | mRNA | upstream | 2649 | 33918813 ~ 33925409 (-) | False | XLOC_032958 |
TCONS_00064036 | mRNA | upstream | 4916 | 33921080 ~ 33925381 (-) | False | XLOC_032958 |
TCONS_00064037 | mRNA | upstream | 4931 | 33921095 ~ 33925432 (-) | False | XLOC_032958 |
TCONS_00064038 | mRNA | upstream | 5137 | 33921301 ~ 33924883 (-) | False | XLOC_032958 |
TCONS_00064039 | mRNA | upstream | 5137 | 33921301 ~ 33924912 (-) | False | XLOC_032958 |
TCONS_00064020 | other | downstream | 188055 | 33726047 ~ 33726148 (-) | True | XLOC_032955 |
TCONS_00064019 | other | downstream | 233119 | 33678377 ~ 33681084 (-) | True | XLOC_032954 |
TCONS_00064015 | other | downstream | 470748 | 33443334 ~ 33443455 (-) | True | XLOC_032953 |
TCONS_00064000 | other | downstream | 1508362 | 32394502 ~ 32405841 (-) | False | XLOC_032943 |
TCONS_00063998 | other | downstream | 1599329 | 32309688 ~ 32314874 (-) | True | XLOC_032941 |
TCONS_00064052 | other | upstream | 728089 | 34644253 ~ 34644370 (-) | True | XLOC_032964 |
TCONS_00064056 | other | upstream | 910491 | 34826655 ~ 34832346 (-) | False | XLOC_032967 |
TCONS_00064055 | other | upstream | 910491 | 34826655 ~ 34832346 (-) | False | XLOC_032967 |
TCONS_00064057 | other | upstream | 916984 | 34833148 ~ 34838299 (-) | True | XLOC_032967 |
TCONS_00064061 | other | upstream | 1015786 | 34931950 ~ 34938693 (-) | False | XLOC_032969 |