Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00064088 |
| length | 1935 |
| lncRNA type | lincRNA |
| GC content | 0.40 |
| exon number | 6 |
| gene id | XLOC_032980 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 35910498 ~ 35914713 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048729 | tissue morphogenesis | biological_process |
| GO:0048731 | system development | biological_process |
| GO:0016072 | rRNA metabolic process | biological_process |
| GO:0022613 | ribonucleoprotein complex biogenesis | biological_process |
| GO:0007498 | mesoderm development | biological_process |
| GO:0001756 | somitogenesis | biological_process |
| GO:0034470 | ncRNA processing | biological_process |
| GO:0006364 | rRNA processing | biological_process |
| GO:0036342 | post-anal tail morphogenesis | biological_process |
| GO:0006396 | RNA processing | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0009888 | tissue development | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0048332 | mesoderm morphogenesis | biological_process |
| GO:0048339 | paraxial mesoderm development | biological_process |
| GO:0048340 | paraxial mesoderm morphogenesis | biological_process |
| GO:0048341 | paraxial mesoderm formation | biological_process |
| GO:0048646 | anatomical structure formation involved in morphogenesis | biological_process |
| GO:0003002 | regionalization | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0061053 | somite development | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0007417 | central nervous system development | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0030902 | hindbrain development | biological_process |
| GO:0060322 | head development | biological_process |
| GO:0030684 | preribosome | cellular_component |
| GO:0045111 | intermediate filament cytoskeleton | cellular_component |
| GO:0005882 | intermediate filament | cellular_component |
| GO:0005730 | nucleolus | cellular_component |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0030515 | snoRNA binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| ensembl_id | ENSDART00000157009 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00064750 | lncRNA | downstream | 160577 | 35749066 ~ 35749921 (-) | True | XLOC_032979 |
| TCONS_00065190 | lncRNA | downstream | 820303 | 35085032 ~ 35090195 (-) | True | XLOC_032973 |
| TCONS_00064073 | lncRNA | downstream | 871453 | 35036515 ~ 35039045 (-) | False | XLOC_032972 |
| TCONS_00065189 | lncRNA | downstream | 953022 | 34947174 ~ 34957476 (-) | False | XLOC_032970 |
| TCONS_00064067 | lncRNA | downstream | 953022 | 34951577 ~ 34957476 (-) | True | XLOC_032970 |
| TCONS_00064751 | lncRNA | upstream | 206610 | 36121319 ~ 36124890 (-) | True | XLOC_032981 |
| TCONS_00064095 | lncRNA | upstream | 372829 | 36287538 ~ 36290625 (-) | False | XLOC_032983 |
| TCONS_00064096 | lncRNA | upstream | 373162 | 36287871 ~ 36289861 (-) | False | XLOC_032983 |
| TCONS_00065192 | lncRNA | upstream | 373177 | 36287886 ~ 36289874 (-) | True | XLOC_032983 |
| TCONS_00065193 | lncRNA | upstream | 471583 | 36386292 ~ 36393495 (-) | True | XLOC_032984 |
| TCONS_00064085 | mRNA | downstream | 131150 | 35675784 ~ 35779348 (-) | False | XLOC_032978 |
| TCONS_00064086 | mRNA | downstream | 171662 | 35675874 ~ 35738836 (-) | True | XLOC_032978 |
| TCONS_00064082 | mRNA | downstream | 422318 | 35459369 ~ 35488180 (-) | False | XLOC_032977 |
| TCONS_00064083 | mRNA | downstream | 423085 | 35461631 ~ 35487413 (-) | False | XLOC_032977 |
| TCONS_00064084 | mRNA | downstream | 437575 | 35462347 ~ 35472923 (-) | True | XLOC_032977 |
| TCONS_00064092 | mRNA | upstream | 212796 | 36127505 ~ 36198052 (-) | False | XLOC_032982 |
| TCONS_00064093 | mRNA | upstream | 216322 | 36131031 ~ 36182115 (-) | False | XLOC_032982 |
| TCONS_00064098 | mRNA | upstream | 636374 | 36551083 ~ 36552844 (-) | False | XLOC_032986 |
| TCONS_00064102 | mRNA | upstream | 803276 | 36717985 ~ 36795219 (-) | False | XLOC_032988 |
| TCONS_00064101 | mRNA | upstream | 803276 | 36717985 ~ 36795219 (-) | False | XLOC_032988 |
| TCONS_00064062 | other | downstream | 971791 | 34932623 ~ 34938707 (-) | False | XLOC_032969 |
| TCONS_00064061 | other | downstream | 971805 | 34931950 ~ 34938693 (-) | False | XLOC_032969 |
| TCONS_00064063 | other | downstream | 971805 | 34932956 ~ 34938693 (-) | False | XLOC_032969 |
| TCONS_00064064 | other | downstream | 971812 | 34933586 ~ 34938686 (-) | True | XLOC_032969 |
| TCONS_00064057 | other | downstream | 1072199 | 34833148 ~ 34838299 (-) | True | XLOC_032967 |
| TCONS_00064094 | other | upstream | 263636 | 36178345 ~ 36197764 (-) | True | XLOC_032982 |
| TCONS_00064097 | other | upstream | 564484 | 36479193 ~ 36502330 (-) | True | XLOC_032985 |
| TCONS_00064104 | other | upstream | 819000 | 36733709 ~ 36733826 (-) | True | XLOC_032989 |
| TCONS_00064105 | other | upstream | 829425 | 36744134 ~ 36744251 (-) | True | XLOC_032990 |
| TCONS_00064106 | other | upstream | 855230 | 36769939 ~ 36770069 (-) | True | XLOC_032991 |
